Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H02
(770 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 24 1.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 24 1.4
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 24 1.4
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 24 1.4
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 24 1.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 1.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 2.4
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 22 5.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.6
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 189 NNAHNNQLIHRTQPQNRERPN 251
NN HN+Q H ++ NR N
Sbjct: 443 NNQHNDQAHHSSKSNNRHNNN 463
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -3
Query: 474 YKEVQ---VPLVKEVPYPVKYHVPIYF 403
YK++Q + ++++P PV VP+Y+
Sbjct: 97 YKKLQYYNINYIEQIPVPVPVPVPVYY 123
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -3
Query: 474 YKEVQ---VPLVKEVPYPVKYHVPIYF 403
YK++Q + ++++P PV VP+Y+
Sbjct: 97 YKKLQYYNINYIEQIPVPVPVPVPVYY 123
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -3
Query: 474 YKEVQ---VPLVKEVPYPVKYHVPIYF 403
YK++Q + ++++P PV VP+Y+
Sbjct: 97 YKKLQYYNINYIEQIPVPVPIPVPVYY 123
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -3
Query: 474 YKEVQ---VPLVKEVPYPVKYHVPIYF 403
YK++Q + ++++P PV VP+Y+
Sbjct: 97 YKKLQYYNINYIEQIPVPVPVPVPVYY 123
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -3
Query: 474 YKEVQ---VPLVKEVPYPVKYHVPIYF 403
YK++Q + ++++P PV VP+Y+
Sbjct: 330 YKKLQYYNINYIEQIPVPVPVPVPVYY 356
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.4 bits (48), Expect = 2.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 559 VRFWYWHFNGDRIGLLYFD 615
++F W FNGD++ L ++
Sbjct: 167 MKFGSWTFNGDQVSLALYN 185
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 275 LKKSHFFFLFDLT*KVLV*ANGFNE 349
+KK F++ L+ V++ ANG NE
Sbjct: 1 MKKFLVIFVYILSVAVIIRANGINE 25
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1
Query: 559 VRFWYWHFNGDRIGLLYFDLVGLVNGDLNFVGHWLVYG 672
++F W ++G+++ L+ G D G W + G
Sbjct: 127 MKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1
Query: 559 VRFWYWHFNGDRIGLLYFDLVGLVNGDLNFVGHWLVYG 672
++F W ++G+++ L+ G D G W + G
Sbjct: 127 MKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1
Query: 559 VRFWYWHFNGDRIGLLYFDLVGLVNGDLNFVGHWLVYG 672
++F W ++G+++ L+ G D G W + G
Sbjct: 127 MKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1
Query: 559 VRFWYWHFNGDRIGLLYFDLVGLVNGDLNFVGHWLVYG 672
++F W ++G+++ L+ G D G W + G
Sbjct: 127 MKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1
Query: 559 VRFWYWHFNGDRIGLLYFDLVGLVNGDLNFVGHWLVYG 672
++F W ++G+++ L+ G D G W + G
Sbjct: 127 MKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1
Query: 559 VRFWYWHFNGDRIGLLYFDLVGLVNGDLNFVGHWLVYG 672
++F W ++G+++ L+ G D G W + G
Sbjct: 127 MKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1
Query: 559 VRFWYWHFNGDRIGLLYFDLVGLVNGDLNFVGHWLVYG 672
++F W ++G+++ L+ G D G W + G
Sbjct: 195 MKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 232
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1
Query: 559 VRFWYWHFNGDRIGLLYFDLVGLVNGDLNFVGHWLVYG 672
++F W ++G+++ L+ G D G W + G
Sbjct: 195 MKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 232
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,884
Number of Sequences: 438
Number of extensions: 3108
Number of successful extensions: 23
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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