Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H01
(768 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0158 - 1067721-1067827,1067951-1068008,1068276-1068334,106... 36 0.047
03_02_0368 + 7840665-7841975 31 0.77
06_03_0231 - 18500825-18501117,18502329-18502746 31 1.0
11_04_0090 - 13391028-13391117,13391369-13391502,13391532-133916... 30 2.3
10_08_0605 + 19158167-19158309,19158726-19158834,19159099-191592... 29 3.1
11_01_0385 + 2915532-2916482 29 4.1
08_01_0377 - 3331696-3332371,3334063-3334472 29 4.1
01_01_0084 - 636835-637965 29 4.1
07_01_0504 + 3756714-3757054,3757205-3757259,3757403-3757477,375... 29 5.4
02_04_0532 + 23711530-23711755,23712984-23713093,23713204-237152... 29 5.4
01_03_0241 - 14111286-14111935,14111992-14112115 29 5.4
10_08_1031 - 22427691-22428086 28 7.1
10_05_0023 + 8171023-8171782,8172658-8172950 28 7.1
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 28 7.1
11_03_0177 + 11269754-11270320,11271701-11272180,11272663-112732... 28 9.4
09_04_0374 + 17051995-17052493,17053026-17053240 28 9.4
07_03_0436 - 18188221-18188373,18189121-18189233,18189817-181898... 28 9.4
07_02_0019 + 11877119-11879984,11880316-11880389,11881293-118815... 28 9.4
06_03_0905 + 25843547-25844314 28 9.4
06_02_0155 + 12380452-12381012 28 9.4
06_01_1013 - 7931756-7935109 28 9.4
02_04_0094 + 19664434-19665078 28 9.4
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875... 28 9.4
01_06_0111 + 26552513-26553361 28 9.4
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 28 9.4
>05_01_0158 -
1067721-1067827,1067951-1068008,1068276-1068334,
1069009-1069087,1069177-1069233,1069531-1069580,
1069805-1069886,1070431-1070487,1070741-1070828,
1071171-1071247,1071325-1071443,1071719-1071950
Length = 354
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +3
Query: 153 VDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQGGLHRR 263
+ RGHV LP +PG P VAA + TG+GG RR
Sbjct: 28 IGRGHVALPP--SPGRYPAVTVAAASRRTGEGGRRRR 62
>03_02_0368 + 7840665-7841975
Length = 436
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 324 TWSQVWFAAAANCSEGSAPYRFRFSSXITAYLPWRPKTSFPQPLATQFLLVSK 482
TW +V + SEG + + S + + L W ++P+PL F L +K
Sbjct: 259 TWEEVLLHGTKHYSEGLSRFCDAKMSEVVSSLGWARARAWPEPLLQAFFLAAK 311
>06_03_0231 - 18500825-18501117,18502329-18502746
Length = 236
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -2
Query: 704 TSTPRAIXGREPENGHPDHQGNXGPPSETRRGNNHTRRFQHEK-P*ERRGAPADARALQP 528
TS ++ REP +P + GN PPS + + T+ + +K ++R AP +
Sbjct: 81 TSLQPSVQSREPNEENPLNPGNCSPPSLSYHVGSRTKHAKGKKSKNQKRKAPMRTEE-EV 139
Query: 527 RRAHQHDLPPGP 492
R H D P P
Sbjct: 140 RMGHFADKCPRP 151
>11_04_0090 -
13391028-13391117,13391369-13391502,13391532-13391659,
13391684-13391718,13391719-13392159
Length = 275
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 254 PPSPWQVSLPSCPPAHTKLSCRRNLVP 334
PP+ Q LP+ PP H LSC + P
Sbjct: 35 PPALLQAILPTAPPKHHSLSCSGSQAP 61
>10_08_0605 +
19158167-19158309,19158726-19158834,19159099-19159224,
19159388-19159543,19159623-19159805,19159904-19160020,
19160528-19160581,19160661-19160732,19160947-19161058,
19161188-19161284,19161434-19161528,19162093-19162167,
19162307-19162390,19162602-19162700,19163167-19163207
Length = 520
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +1
Query: 232 MGQARGGSTVALASVPALLSPGAHETVVQTEPGPKSGSLQQRIAARVRHHIDFDF 396
M + G+ VA +V LL+PGA + P G AA R H+ F F
Sbjct: 1 MASSAVGAAVAAVAVLLLLAPGAEPIGLWLPPPTGGGGRLGGAAAPGRFHVSFTF 55
>11_01_0385 + 2915532-2916482
Length = 316
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +3
Query: 117 PVDPRPHAGHVGVDRGHVLLPAPD----APGDQPGQLVAAVTYGTGQGGLHRRPGKCPCP 284
P + H H D+ + PAP P P A+ +G G+ RPG P
Sbjct: 121 PPKSKHHGRHAPPDQPELSPPAPPPESYTPDAPPAPEAASPHHGGGENPAWPRPGNNQWP 180
Query: 285 PVP 293
P+P
Sbjct: 181 PLP 183
>08_01_0377 - 3331696-3332371,3334063-3334472
Length = 361
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 87 GGSVTPRVHLPVDPRPHAGHVGVDRGHVLLPAPDAPGDQ--PGQLVAAVTYG 236
GG V V V PH + D HV+ AP PG + G + A+V G
Sbjct: 205 GGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRG 256
>01_01_0084 - 636835-637965
Length = 376
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 242 PGGAPPSPWQVSLPS-CPPAHTKLSCRRNLVPSLVRCSSELQRGFGTISISI 394
PG APP P +LP+ PP+ LS P+L +S L + S+S+
Sbjct: 28 PGAAPPPPTSSALPTQIPPSDWSLS---PADPALATAASFLSTSLSSTSVSL 76
>07_01_0504 +
3756714-3757054,3757205-3757259,3757403-3757477,
3757638-3757729,3757914-3757995,3758138-3758221,
3758326-3758445
Length = 282
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 202 WSPGASGAGRRTCPRSTPTWPA 137
WS G G GR P S P WPA
Sbjct: 33 WSNGGGGGGRLVAPPSAP-WPA 53
>02_04_0532 +
23711530-23711755,23712984-23713093,23713204-23715298,
23716092-23716153,23716236-23716277,23716614-23716673,
23716873-23717010,23717333-23717374,23717452-23717574
Length = 965
Score = 28.7 bits (61), Expect = 5.4
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = +3
Query: 162 GHVLLPAPDAPGDQPGQLVAAVTYGTGQGGLHRRP----GKCPCPPVP-RRTRNCRADGT 326
G V+ D G+LVAA+ G G+ H R G P+ R+ R CR
Sbjct: 33 GDVVCGEHDHDARDTGELVAALA-GLGEDDEHLRGAGRVGSGEVVPIHLRKERRCRGYFL 91
Query: 327 WSQVWFAAAANCSEGSAPYRFRFSSXIT 410
W AA APYRFR SS T
Sbjct: 92 PLSPWTTQAAY-----APYRFRVSSQRT 114
>01_03_0241 - 14111286-14111935,14111992-14112115
Length = 257
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -3
Query: 430 GLQGRYAVIXEENRNRYGAEPSL--QFAAAANQTWDQVPSARQFRVRRGTGGQGHL 269
G GR R R G E + A AA W A + R RRG+GG+G +
Sbjct: 141 GRCGREKTAAARARWRRGGEKGRGGEEATAARARWSSGKKAARARWRRGSGGEGEV 196
>10_08_1031 - 22427691-22428086
Length = 131
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 105 RVHLPVDPRPHAGHVGVDR-GH-VLLPAPDAPGDQP 206
R HL P+P A H GV R GH V PAP +P P
Sbjct: 27 RAHL--GPKPPARHYGVRRVGHGVPAPAPPSPPPHP 60
>10_05_0023 + 8171023-8171782,8172658-8172950
Length = 350
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 704 TSTPRAIXGREPENGHPDHQGNXGPPSETRRGNNHTRRFQHEK-P*ERRGAP 552
TS ++ REP +P + GN PPS + + T++ + +K ++R AP
Sbjct: 81 TSLQPSVQSREPNGENPWNPGNCFPPSLSYHVGSRTKQAKGKKSKNQKRKAP 132
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 473 GVEAIPRVREADHVDVLGEVE 535
G+E P +R+AD DV+G+VE
Sbjct: 45 GLERSPSLRQADFADVVGDVE 65
>11_03_0177 + 11269754-11270320,11271701-11272180,11272663-11273292,
11273377-11273443,11273510-11273620,11273696-11275206
Length = 1121
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 571 KNDVALLRMHAPFNLAEHINMICLPDPGDSFDTSKNCVA--NGWGKDVFGLQGR 416
+ +AL M++ NLAE INM+ + D F+ C++ G DV L+ R
Sbjct: 965 REGIALGLMYSFTNLAESINMLNVHDDNAVFEHKMRCISVLEADGFDVRHLRSR 1018
>09_04_0374 + 17051995-17052493,17053026-17053240
Length = 237
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 204 PGQLVAAVTYGTGQGGLHRRPGK 272
PG++VA V G QGG RPG+
Sbjct: 71 PGEVVAGVVVGGMQGGGRPRPGR 93
>07_03_0436 -
18188221-18188373,18189121-18189233,18189817-18189889,
18189979-18190046,18190132-18190372,18191614-18191732,
18192977-18193028,18193178-18193192
Length = 277
Score = 27.9 bits (59), Expect = 9.4
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Frame = +3
Query: 45 CGR--FYFGNVLNSVSGGSVTPRVHLP--VDPRPHAG----HVGVDRGHVLLPAPDAPGD 200
CG F F NV N + G+ P L V P P AG H+G DR H+ + P
Sbjct: 35 CGNVNFSFRNVCNRGACGAPRPSPSLSPRVPPPPAAGYDRPHLGYDRPHLFYGSAGTPPP 94
Query: 201 QPGQLVAAVTYGTGQGGLHRRPGKCP 278
P + + +YG L R G P
Sbjct: 95 IP---LGSGSYGAPYPHLGLRYGYGP 117
>07_02_0019 +
11877119-11879984,11880316-11880389,11881293-11881511,
11881557-11881679,11881759-11881859,11881938-11881990,
11882084-11882269,11882677-11882894
Length = 1279
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 259 VALASVPALLSPGAHETVVQTEPGPKSGSLQQRIAARVRHHIDFDFLQXSPRICP 423
V+ + +P+ LSP A ++V+ P P S L ++ +DF F SP++ P
Sbjct: 70 VSSSDLPSRLSPAAISSLVRRRPSPSSPRLHPKLL------LDF-FYWSSPQLAP 117
>06_03_0905 + 25843547-25844314
Length = 255
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 225 VTYGTGQGGLHRRPGKCPCPPVPRRTRNCRAD 320
VTY T P PCPP P T+ C D
Sbjct: 144 VTYPTPPVTYPTPPTTTPCPPPPPATQRCPVD 175
>06_02_0155 + 12380452-12381012
Length = 186
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = +3
Query: 111 HLPVDPRPHAGHVGVDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQ 245
H P P PHAG G AP AP P V A TYG Q
Sbjct: 36 HKP-SPPPHAGGAVNGNGGA---APPAPATSPDTEVRAPTYGDKQ 76
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 27.9 bits (59), Expect = 9.4
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Frame = +3
Query: 102 PRVHLP-VDPRPHAGHVGVDRGHVLLPAPD-APGDQPGQLVAAVTYGT-GQGGLHR---- 260
PR P + P P A DR +LP+P+ A D+P Q G GG R
Sbjct: 30 PRSTAPDIPPPPRAAAPAPDRIGPILPSPNPASEDRPQQQQRRPRRRNHGGGGQRRGPPQ 89
Query: 261 -RPGKCPCPPVPRR 299
RP P PP P++
Sbjct: 90 ERPSAAPPPPPPQQ 103
>02_04_0094 + 19664434-19665078
Length = 214
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 300 CAGGQEGR-DTCQGDGGAPPGLSHR*QPLQVGRAGRLGHRVRAEGRAR 160
CAG R TC G GG + P +A R R R GRAR
Sbjct: 96 CAGAPAARMPTCAGGGGTAKAVVIAGLPAAARKASREHERRRRLGRAR 143
>01_06_0595 -
30485460-30486097,30486721-30487179,30487339-30487558,
30488229-30489980
Length = 1022
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -3
Query: 298 RRGTGGQGHLPGXXXXXXXXXXXXXXXXSWPGWSPGASGAGRRTCPRS 155
R G GG GHL G G GAS +GRR P S
Sbjct: 15 RGGGGGGGHLRGHAHLTNCIHLRHHHAHGGGGGGGGASSSGRRRSPTS 62
>01_06_0111 + 26552513-26553361
Length = 282
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 180 RAEGRARGLRQRGPHEVL 127
+ EG A+GLRQRGP +L
Sbjct: 96 QGEGDAKGLRQRGPPHIL 113
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 27.9 bits (59), Expect = 9.4
Identities = 24/99 (24%), Positives = 46/99 (46%)
Frame = -3
Query: 691 GQXEGESRRMDTQTIKEMXDHQVRLVEEIIIHEDFNTKSLKNDVALLRMHAPFNLAEHIN 512
G EGE DTQ + L +++ + EDF+++ ++ D + +L +++
Sbjct: 279 GFEEGEIEG-DTQNLDADDSGNSELQDDVELEEDFDSRRIEEDGS-----CGHDLKSNLH 332
Query: 511 MICLPDPGDSFDTSKNCVANGWGKDVFGLQGRYAVIXEE 395
+I P G+ DT++N + N G + AV +E
Sbjct: 333 LI--PQKGNG-DTARNMLCNSKGDSQMHVARAQAVSYDE 368
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,860,937
Number of Sequences: 37544
Number of extensions: 604487
Number of successful extensions: 2490
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2487
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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