Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G24
(831 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 347 2e-96
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 343 1e-95
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 144 1e-35
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 78 1e-15
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 42 1e-04
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 35 0.016
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 31 0.15
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 31 0.20
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.20
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.20
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 30 0.35
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 30 0.35
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.81
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.4
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.4
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.3
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 4.3
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 4.3
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 5.7
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 5.7
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.7
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.7
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.7
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.5
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 7.5
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 25 10.0
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 10.0
SPBC2G2.04c |mmf1|pmf1|YjgF family protein Mmf1|Schizosaccharomy... 25 10.0
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 25 10.0
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 347 bits (852), Expect = 2e-96
Identities = 152/189 (80%), Positives = 171/189 (90%)
Frame = -1
Query: 699 DLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHG 520
DL EFQTNLVPYPRIHFPLVTY+P++SA KA+HE SV EITN CFEP NQMVKCDPR G
Sbjct: 255 DLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTG 314
Query: 519 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 340
+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +AK
Sbjct: 315 RYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAK 374
Query: 339 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 160
V RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+
Sbjct: 375 VNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALER 434
Query: 159 DYEEVGMDS 133
DYEEVG DS
Sbjct: 435 DYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 343 bits (844), Expect = 1e-95
Identities = 152/189 (80%), Positives = 169/189 (89%)
Frame = -1
Query: 699 DLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHG 520
DL EFQTNLVPYPRIHFPLVTYAP++SA KA+HE SV EITN CFEP NQMVKCDPR G
Sbjct: 251 DLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAG 310
Query: 519 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 340
+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++AK
Sbjct: 311 RYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAK 370
Query: 339 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 160
V RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+
Sbjct: 371 VDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALER 430
Query: 159 DYEEVGMDS 133
DYEEVG DS
Sbjct: 431 DYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 144 bits (349), Expect = 1e-35
Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Frame = -1
Query: 699 DLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHG 520
DL + N+VP+PR+HF +V +AP+ + + + +SV E+T F+ N MV DPRHG
Sbjct: 249 DLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHG 308
Query: 519 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 340
+Y+ L+RG V K+V+ I +++TK + FV+W P + PP DL
Sbjct: 309 RYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL-- 361
Query: 339 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAA 169
+ + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA DL +
Sbjct: 362 -KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 168 LEKDYEEVGMD 136
+ Y+E G+D
Sbjct: 421 EYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 78.2 bits (184), Expect = 1e-15
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Frame = -1
Query: 699 DLTEFQTNLVPYPRIHFPLVTYAPVISA---EKAYHEQLSVAEITNACFEPANQMVKCDP 529
DL +L+P PR HF L +Y P + E + +V ++ P NQMV +P
Sbjct: 252 DLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNP 311
Query: 528 -RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 352
+ +++ + +G+ P DV+ ++ I+ +R F+ W P +V ++ + P +
Sbjct: 312 SKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNH 371
Query: 351 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEARE 181
++ + ML+N T+IA + R ++D + + AF+ Y E + E EF +R+
Sbjct: 372 RVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRD 426
Query: 180 DLAALEKDYE 151
+A L +YE
Sbjct: 427 VVADLINEYE 436
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 41.5 bits (93), Expect = 1e-04
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 3/177 (1%)
Frame = -2
Query: 698 TSPSSRLTWSLTPVSTSHWSRTRQSSLPRRPTM--NSFPSPRSQTHASSPPTRW*NATPV 525
TS S L+ S + +++ T S+ P PT+ S +P + T+ ++ + +TPV
Sbjct: 381 TSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Query: 524 MASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATW 345
++ CT TS P T + S P +N +T S TS P T
Sbjct: 441 TSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCT- 497
Query: 344 PRFNVPSACCPTPLPSPKLGLALTTSSTSCTPSVLSC-TGTSVRVWRRESSPKPVRT 177
+VP TP+ S ++ +T TS + +C T TSV + P+ T
Sbjct: 498 TSTSVPYT--STPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLAT 552
Score = 31.1 bits (67), Expect = 0.20
Identities = 53/217 (24%), Positives = 85/217 (39%), Gaps = 11/217 (5%)
Frame = -2
Query: 707 LNVTSPSSRL-TWSLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NAT 531
+ +TS S T + TP+ T S T +S T S SP T S + +
Sbjct: 70 VEITSTSCTTDTSASTPIITESTSSTSSAS-----TTGSSSSPLPSTSTSCTTST--SIP 122
Query: 530 PVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPV---SRSVST-TSHPPW 363
P S+ L+ T T P + S+P P+ S++ T P+ S S +T TS PP
Sbjct: 123 PTGGSSSLSTPITP-TVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPT 181
Query: 362 --CPEATWPRFNV--PSACCPTPLPSPKLGLALTTSSTSCTP--SVLSCTGTSVRVWRRE 201
+ P P++ T +P P + T +++S P S T TS+
Sbjct: 182 GGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSS 241
Query: 200 SSPKPVRTWLPSRRITKKSAWTPLKARVREPKSTKPM 90
S P+ +P + S P + ++ P+
Sbjct: 242 SLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPL 278
Score = 30.7 bits (66), Expect = 0.26
Identities = 42/174 (24%), Positives = 76/174 (43%)
Frame = -2
Query: 665 TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 486
TP++T++ T +S+P T + +P + T+ ++ + +TPV +S + T V
Sbjct: 466 TPLTTTNC--TTSTSIPYTSTPVT-STPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPV 522
Query: 485 TSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTP 306
TS P T + + SVL S+ PV+ + T++ + V S+
Sbjct: 523 TSTPV--TTTNCTTSTSVLYTST----PVTSTPLATTNCTTSTSVPYTSTPVTSSNYTIS 576
Query: 305 LPSPKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKS 144
+P +TT++ + + SVL T T + SS +W + IT S
Sbjct: 577 SSTPVTSTPVTTTNCTTSTSVL-YTSTPITSPNSTSSSSTQVSWNSTTPITGTS 629
Score = 30.3 bits (65), Expect = 0.35
Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 7/183 (3%)
Frame = -2
Query: 704 NVTSPSSRLTWSLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPV 525
N T+P +T ++ P STS S + +S P P + T ++ + P
Sbjct: 296 NSTTP---VTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTS-----TSIPP 347
Query: 524 MASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVST-TSHPPWCPEAT 348
++ V TV + + P P+ S SS+ + S S +T TS PP T
Sbjct: 348 TGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTT 407
Query: 347 WPRFNVPSACCPTPLP----SPKLGLALTTSSTSCTP-SVLSC-TGTSVRVWRRESSPKP 186
VP TPL + + T++ + TP + +C T TSV + P
Sbjct: 408 PVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTP 467
Query: 185 VRT 177
+ T
Sbjct: 468 LTT 470
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 34.7 bits (76), Expect = 0.016
Identities = 47/164 (28%), Positives = 66/164 (40%), Gaps = 3/164 (1%)
Frame = -2
Query: 704 NVTSPSSRLTWSLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPV 525
++ S S T S T S+S S +S T +S S + S+ T ++ V
Sbjct: 194 SLASSSLNSTTSATATSSSLSSTAASNSA----TSSSLASSSLNSTTSATATSSSISSTV 249
Query: 524 MASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSST-GVQPVSRSVSTTSHPPWCPEAT 348
+ST L + + T S S L SST P+S + STT+ T
Sbjct: 250 SSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLT 309
Query: 347 WPRFNVPSACCPTPLPSPKLGLALTTSSTSCTP--SVLSCTGTS 222
++ TPL S + T +STS TP SV S T TS
Sbjct: 310 SVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATS 353
Score = 33.5 bits (73), Expect = 0.038
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 2/166 (1%)
Frame = -2
Query: 710 ALNVTSPSSRLTWSLTPVSTSH--WSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*N 537
A +S S S TP+++S+ + T S+ N+ S T +S+P + +
Sbjct: 238 ATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANS 297
Query: 536 ATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 357
T AS+ T+ T S S + + +ST P+S STT+
Sbjct: 298 TTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASST 357
Query: 356 EATWPRFNVPSACCPTPLPSPKLGLALTTSSTSCTPSVLSCTGTSV 219
T ++ TPL S A + SST T S S T TSV
Sbjct: 358 PLTSVNSTTATSASSTPLTSVNSTSATSASSTPLT-SANSTTSTSV 402
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 31.5 bits (68), Expect = 0.15
Identities = 36/139 (25%), Positives = 56/139 (40%)
Frame = -2
Query: 608 PTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVL 429
PT S P PR T S+ R PV+ + A + + P+ SKP+ +
Sbjct: 964 PTSKSKPFPRLATGGSTAAAR--GPRPVVQNKPAAT---------KPVSMPAAKSKPAPM 1012
Query: 428 SNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPLPSPKLGLALTTSSTSCTP 249
+N PVS + T + PP A R N A P + + A T S++ P
Sbjct: 1013 AN------PVSTAQQTQNRPP--APAMQARPNTTQAAAPVTSTTTTIKQATTVSASKPAP 1064
Query: 248 SVLSCTGTSVRVWRRESSP 192
S ++ +S + S+P
Sbjct: 1065 STVTSAASSPSNISKPSAP 1083
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 31.1 bits (67), Expect = 0.20
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +1
Query: 451 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDW 630
S G +LGY ++ A++V+A + V HL+ G D + K G D
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459
Query: 631 RVRDQWEVDTGVRD 672
R Q+E++ G++D
Sbjct: 460 VDRVQYELEAGLQD 473
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.20
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = -2
Query: 623 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 444
S+P+ P P S + P P + S VV P + RP++P
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 443 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 357
P LS V PV+ V + PP P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.20
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = -2
Query: 485 TSYPRM*TRPSLP-SKPSVLSNSS--TGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 315
TS P PS P SKP S ++ V PV + +S+ + P P A P VPS
Sbjct: 983 TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK-LSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 314 PTPLPSPKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPV 183
P P+P+ + ++S P + + + S PV
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 701 VTSPSSRLTWSLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 546
V P+++ P S + T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1229 VPVPTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 30.3 bits (65), Expect = 0.35
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 437 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPLPSPKLGL-ALTTSST 261
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 260 SCTPSVLS 237
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 30.3 bits (65), Expect = 0.35
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 437 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPLPSPKLGL-ALTTSST 261
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 260 SCTPSVLS 237
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 0.81
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -2
Query: 656 STSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSY 477
STS + T SS RP +S S +H SS ++ ++ PV ++ + + +S+
Sbjct: 377 STSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNSTSSRSSSH 435
Query: 476 PRM*TRPSLPSKPSVLSNSST 414
+ SL SKP + ++SS+
Sbjct: 436 SSSHSLSSLSSKPILTASSSS 456
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 579 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 454
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 287 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 114
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 113 EPKSTK 96
EP+ TK
Sbjct: 208 EPRFTK 213
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.6 bits (56), Expect = 4.3
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -2
Query: 695 SPSSRLTWSLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSP 555
SPS LT +L S++ S + + + R+ T +S SP+ Q+ S+P
Sbjct: 619 SPSKMLT-TLRNNSSTFPSLRKNAMIARKSTADSLSSPKRQSVPSTP 664
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.6 bits (56), Expect = 4.3
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = -2
Query: 725 LRFDGALNVTSPSSRLTWSLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQT-HASSPPT 549
L+ +L ++SP ++ SLT STS + T S P + S P S T ++SS T
Sbjct: 553 LQTSSSLIISSPI--ISSSLTATSTSTPALT-HSITPSNTSYTSSLIPSSSTDYSSSLIT 609
Query: 548 RW*NATPVMASTWLAVCCTVVTS 480
N T ++ST LA + +TS
Sbjct: 610 VCSNVTSEISSTSLASLISTLTS 632
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 4.3
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -2
Query: 395 RSVSTTSHPPWCPEATWPRFNVPSACCPTPLPSPKLGLALTTSSTSCTPSVLS 237
++ S T+ P P ++ FN PSA + PSP + + ++ + TPS S
Sbjct: 453 KAPSATTDKPSPPVSSIFSFNAPSAA--STKPSPAVSSTFSFNAPTTTPSATS 503
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 5.7
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Frame = -2
Query: 692 PSSRLTWSLTPV--STSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 519
P+S +T + TPV S+S S S T S + S T +SSP + P
Sbjct: 246 PTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGSATVSSSPFYSNSSVIPTSV 305
Query: 518 STWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPR 339
+ ++ + +SY +L + + ++ + TG + S + TS PP+ ++
Sbjct: 306 PSSVSSFTSSSSSYTT-----TLTASNTSVTYTGTG----TGSATFTSSPPFYSNSSVIP 356
Query: 338 FNVPSACCPTPLPSPKLGLALTTSSTSCT 252
+VPS+ + LT S+TS T
Sbjct: 357 TSVPSSVSSFTSSNSSYTTTLTASNTSIT 385
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 629 QSSLPRRPTMNSFPSPRSQTHASSPPTR 546
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 710 ALNVTSPSSRLTWSLTPVSTSHWS 639
A++VTSP+ TW V+T WS
Sbjct: 20 AVSVTSPTRDTTWQSGQVNTVTWS 43
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.7
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 455 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 369
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 5.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -2
Query: 350 TWPRFNVPSACCPTPLPSPKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKP 186
T+ ++ AC + + L + T SSTS PS++ T TS + SS P
Sbjct: 101 TYSQYFTLQACSTCTISTSSLSYSGTISSTSIAPSMIG-TRTSSSYFITSSSSTP 154
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 474 WVRRHHGTAYSKPCTCHDGG 533
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 7.5
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -2
Query: 668 LTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 516
LTP + S +S + +S +R ++N+ PS + +H+SS T + PV+++
Sbjct: 130 LTPKNPSLFSSSNAAS--QRGSLNTAPSNFAYSHSSSLQTSASSRPPVLSN 178
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 25.4 bits (53), Expect = 10.0
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = -2
Query: 488 VTSYPRM*TRPSLP--SKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 315
+T+ R T+P+ P S+ +N + S S+ S P +A +VP +
Sbjct: 498 LTNKARNATQPTQPPVSQVDYSNNLPPNLDTSSTFRSSASPPSAFTKAGNEALSVPLSGA 557
Query: 314 PTPLPSPKLGLALTTSSTSCTPSVLSCTGT 225
S LA SS S +L C GT
Sbjct: 558 RNTAASRPTNLAAGNSSASIVQQLLECGGT 587
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 458 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 363
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
>SPBC2G2.04c |mmf1|pmf1|YjgF family protein Mmf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 162
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 344 PRFNVPSACCPTPLPSPKLGLALTTSSTSCTPSVLSCTG 228
PRF + TP+ SPKL A + V+ C+G
Sbjct: 29 PRFFIHKMSTKTPINSPKLSSAGPYNQAIKANGVIYCSG 67
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 25.4 bits (53), Expect = 10.0
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = -2
Query: 662 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVT 483
P+ SH S + S+ R + + H S PT+ +AT + S AV T
Sbjct: 253 PLDASHLSSQQLLSMYRDQVSHGVTPSTFRNHESFMPTQLVSATELSKSVDNAVLPIPPT 312
Query: 482 SYPRM*TRPSLPSKPSVLSNSSTG 411
+ P + P S P + S +++G
Sbjct: 313 TAPAV-VSPPASSFPLMSSAATSG 335
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,124,080
Number of Sequences: 5004
Number of extensions: 71128
Number of successful extensions: 312
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 408446760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -