Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G20
(776 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 54 1e-07
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 54 1e-07
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 48 1e-05
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 43 2e-04
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 31 1.4
SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07) 28 7.3
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 28 9.7
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 28 9.7
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 28 9.7
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 28 9.7
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 28 9.7
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 28 9.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKRISEQFTAMFRRKAFLH YT G
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKRISEQFTAMFRRKAFLH YT G
Sbjct: 319 IQELFKRISEQFTAMFRRKAFLHWYTGEG 347
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 343 YTGEGMDEMEFTEAESNMNDLVSEYQQY 370
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKRISEQFTAMFRRKAFLH YT G
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKR+ EQFTAMFRRKAFLH YT G
Sbjct: 139 IQELFKRVGEQFTAMFRRKAFLHWYTGEG 167
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNM+DL++EYQQY
Sbjct: 163 YTGEGMDEMEFTEAESNMHDLIAEYQQY 190
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKR+ EQFTAMFRRKAFLH YT G
Sbjct: 201 IQELFKRVGEQFTAMFRRKAFLHWYTGEG 229
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNM+DL++EYQQY
Sbjct: 225 YTGEGMDEMEFTEAESNMHDLIAEYQQY 252
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQE F+R +EQF AMFRR+AFLH YT G
Sbjct: 193 IQEAFRRFTEQFAAMFRRRAFLHWYTTEG 221
Score = 32.7 bits (71), Expect(2) = 0.033
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -1
Query: 656 FTEAESNMNDLVSEYQQY 603
+ A+SN+NDL+SEYQQY
Sbjct: 256 YFSADSNLNDLISEYQQY 273
Score = 22.2 bits (45), Expect(2) = 0.033
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESN 636
+ GMD +EFTE + N
Sbjct: 217 YTTEGMDPLEFTEIKRN 233
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKRI + MFRR+AFLH YT G
Sbjct: 279 IQELFKRIRLHYKLMFRRRAFLHWYTEEG 307
Score = 31.5 bits (68), Expect = 0.79
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1
Query: 674 GMDEMEFTEAESNMNDLVSEYQQ 606
GMD +F EA++++ DL+S YQQ
Sbjct: 307 GMDSQQFEEADNDILDLISTYQQ 329
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 763 PIQELFKRISEQFTAMFRRKAFLHXYTRRG 674
PI E + R+ +F M+ ++AF+H Y G
Sbjct: 296 PIAEAWARLDHKFDLMYAKRAFVHWYVGEG 325
>SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07)
Length = 502
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 183 NQVQPYKKKDLFPLCDSVTAPRACSAEGLASLRVAVYCNKHSRAALR 323
+++Q L LC SV+ C+ A L ++C + S A LR
Sbjct: 136 SRLQQLASLSLTDLCQSVSGDEGCAVAETAELIALMHCLESSAATLR 182
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 368 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 396
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 536 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 564
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 321 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 349
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 755 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 783
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 1164 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 1192
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 369 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 397
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 800 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 828
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 349 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 377
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 817 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 845
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 969 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 997
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 309 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 337
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 182 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 210
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,584,647
Number of Sequences: 59808
Number of extensions: 344991
Number of successful extensions: 846
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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