Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G19
(1274 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.048
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.11
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.45
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.59
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.79
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.0
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 29 1.4
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 2.4
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 7.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.048
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = +3
Query: 252 PXPPPXXXXXXXXPXPXXPPPPXXPPXXXXXXXPXXXXPXXXPPXXXXXXXXXPPPPPP 428
P PPP P P P P PP P P PP PPPPPP
Sbjct: 732 PPPPPPAVIV---PTPAPAPIPVPPPAPIMGGPP----PPPPPPGVAGAGPPPPPPPPP 783
Score = 33.1 bits (72), Expect = 0.084
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +2
Query: 257 PPP----PXXXXXXXPXPPXXPPXXXPPPPXXXXXXXPXXPXXPPPXP 388
PPP P P PP P PPPP P PPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.5 bits (68), Expect = 0.26
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 7/51 (13%)
Frame = +2
Query: 257 PPPPXXXXXXXPXP---PXXPPXXX----PPPPXXXXXXXPXXPXXPPPXP 388
PPPP P P P PP PPPP P PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.26
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 241 PPXXXPPPPXPXPXPXXXXPXXPPXPXPPP 330
P PPPP P P P PP P PPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGP--PPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.34
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +1
Query: 262 PPXPXPXPXXXXPXXPPXPXPPPXXXXXXXXXXXXPXXXPPXXXXXPPPXP 414
PP P P P P P PPP P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.1 bits (67), Expect = 0.34
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Frame = +2
Query: 242 PPXXXPPPPXXXXXXXPXP-PXXPPXXXPPPPXXXXXXXPXXPXXPPP 382
PP P P P P P PPPP P P PPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 204 PXXXXXXPPPXXXPXXPXPPPXXXXXXXXPXPXXPPPP 317
P PP P PPP P P PPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 225 PPPXXXPXXPXPPPXXXXXXXXPXPXXPPPPXXPPXXXXXXXPXXXXP 368
PPP P P P P PPPP PP P P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPA-PIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 225 PPPXXXPXXPXPPPXXXXXXXXPXPXXPPPPXXP 326
PPP P PPP P PPPP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPP--PPPPPPP 783
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.11
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 241 PPXXXPPPPXPXPXPXXXXPXXPPXPXPP 327
PP PPPP P P P PP P PP
Sbjct: 5 PPGNPPPPPPP---PGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 308 PPXXXPPPPXXXXXXXPXXPXXPPP 382
PP PPPP P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 296 PPXXPPXXXPPPPXXXXXXXPXXPXXPPP 382
PP PP PPPP P PPP
Sbjct: 5 PPGNPP---PPPPPPGFEPPSQPPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.45
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 241 PPXXXPPPPXPXPXPXXXXPXXPPXPXP 324
PP PPPP P P P PP P P
Sbjct: 1710 PPMSVPPPPSAPPMPAGP-PSAPPPPLP 1736
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 241 PPXXXPPPPXPXPXPXXXXPXXPPXPXPPP 330
PP P P P P P PP P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +2
Query: 245 PXXXPPPPXXXXXXXPXPPXXPPXXXPPPPXXXXXXXPXXPXXPPPXP 388
P P P PP PP PPPP PPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPP-PPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 228 PPXXXPXXPXPPPXXXXXXXXPXPXXPPPPXXPPXXXXXXXPXXXXPXXXPP 383
PP P PPP P P PP P PP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVP----PPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 91 PXXXXPXPXPXXXXXPXPPXXPPXP 165
P P P P P PP PP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMP 1724
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.59
Identities = 19/76 (25%), Positives = 19/76 (25%), Gaps = 1/76 (1%)
Frame = +1
Query: 106 PXPXPXXXXXPXPPXXPPXPXXXXPXXXXX-PXXXXXXXXXXXXXXPPXXXPPPPXPXPX 282
P P P P PP P P PP P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 283 PXXXXPXXPPXPXPPP 330
P P PP PP
Sbjct: 1203 PSVGVPPVPPPSTAPP 1218
Score = 29.9 bits (64), Expect = 0.79
Identities = 20/84 (23%), Positives = 20/84 (23%)
Frame = +3
Query: 177 PXXXXXPXXPXXXXXXPPPXXXPXXPXPPPXXXXXXXXPXPXXPPPPXXPPXXXXXXXPX 356
P P P P P P PP P P P PP P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE-IPSIPAPSGAPPVPAPSGIPP 1093
Query: 357 XXXPXXXPPXXXXXXXXXPPPPPP 428
P P PP P P
Sbjct: 1094 VPKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 27.9 bits (59), Expect = 3.2
Identities = 20/83 (24%), Positives = 20/83 (24%)
Frame = +3
Query: 177 PXXXXXPXXPXXXXXXPPPXXXPXXPXPPPXXXXXXXXPXPXXPPPPXXPPXXXXXXXPX 356
P P P PP P P P P PP P P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP---AAGVPP 1190
Query: 357 XXXPXXXPPXXXXXXXXXPPPPP 425
P PP P PPP
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/84 (23%), Positives = 20/84 (23%)
Frame = +3
Query: 177 PXXXXXPXXPXXXXXXPPPXXXPXXPXPPPXXXXXXXXPXPXXPPPPXXPPXXXXXXXPX 356
P P P PP P P P P PP P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP----SVAAPP 1170
Query: 357 XXXPXXXPPXXXXXXXXXPPPPPP 428
P P PP PPP
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Frame = +2
Query: 242 PPXXXPPPPXXXXXXXPXPPXXPPXXXP-PPPXXXXXXXPXXPXXPPPXP 388
PP PP P P PP P P P P P PP P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP--PSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.79
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 242 PPXXXPPPPXXXXXXXPXPPXXPPXXXPPPPXXXXXXXPXXPXXPPP 382
PP PP P P P P P P P PPP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +2
Query: 242 PPXXXPPPPXXXXXXXPXPPXXPPXXXPPPPXXXXXXXPXXPXXPPPXP 388
PP P P P PP P P P P PP P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/78 (26%), Positives = 21/78 (26%), Gaps = 1/78 (1%)
Frame = +3
Query: 195 PXXPXXXXXXPPPXXXPXXP-XPPPXXXXXXXXPXPXXPPPPXXPPXXXXXXXPXXXXPX 371
P P PP P P PPP P P P PP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP------PAQPAAPV 181
Query: 372 XXPPXXXXXXXXXPPPPP 425
PP PP PP
Sbjct: 182 KSPPSAPSLPSAVPPMPP 199
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/83 (25%), Positives = 21/83 (25%), Gaps = 3/83 (3%)
Frame = +1
Query: 91 PXXXXPXPXPXXXXXPXPPXXPPXPXXXXPXXXXXPXXXXXXXXXXXXXXPPXXXPPP-- 264
P P P P P PP P P P PP P
Sbjct: 124 PPSAPAPPTPQSELRP-PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 265 -PXPXPXPXXXXPXXPPXPXPPP 330
P P P PP PPP
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +1
Query: 241 PPXXXPPPPXPXPXPXXXXPXXPPXPXPPPXXXXXXXXXXXXPXXXPPXXXXXPPP 408
PP PP P P P P P P P PP PPP
Sbjct: 151 PPSPASAPPIPSKAPPI--PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 241 PPXXXPPPPXPXPXPXXXXPXXPPXPXPPPXXXXXXXXXXXXPXXXPPXXXXXPPPXPXX 420
P PP P P P P P P P P PP PPP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPI------PSKAPPIPSSLPPPAQPA 178
Query: 421 XP 426
P
Sbjct: 179 AP 180
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 242 PPXXXPPPPXXXXXXXPXPPXXPPXXXPPPPXXXXXXXPXXPXXPPPXP 388
PP PP P P P PP PP P P P P
Sbjct: 139 PPTSAPPRP---SIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 1.0
Identities = 20/78 (25%), Positives = 20/78 (25%), Gaps = 10/78 (12%)
Frame = +3
Query: 225 PPPXXXPXXPXPPPXXXXXXXXPXPXXPPPPXXPPXXXXXXXP----------XXXXPXX 374
PPP P P P P PPPP P P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 375 XPPXXXXXXXXXPPPPPP 428
P PPPPPP
Sbjct: 227 YTPKQADPLPAPPPPPPP 244
Score = 27.5 bits (58), Expect = 4.2
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 241 PPXXXPPPPXPXPXPXXXXPXXPPXPXPPP 330
PP PP P PP P PPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +1
Query: 136 PXPPXXPPXPXXXXPXXXXXPXXXXXXXXXXXXXXPPXXXPPPPXPXPXPXXXXPXXPPX 315
P PP PP P PP P P P P PP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPP-----PPP 243
Query: 316 PXPPP 330
P PP
Sbjct: 244 PTLPP 248
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 256 PPPPXPXPXPXXXXPXXPPXPXPPP 330
PPPP P P P P P P P
Sbjct: 356 PPPPPPMPAPIYNVPNVPTVPTVSP 380
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -1
Query: 413 GXGGGXXXXXGGXXXGXXXXXXXXXXXXGGGXGXGGXXGXXXXGXGXGXGGGGXXXGG 240
G G GG G GG G GG G G G G GGG GG
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG-GFGGGPGGHGG 270
Score = 27.1 bits (57), Expect = 5.5
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = -2
Query: 427 GGGGGGXXXXXXXXXGGXXXGXXXXGXXXXXXXGGXXGGGGXXGXGXXXXXXXXGGGXGX 248
GG GGG G G GG GG G G GG G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Query: 247 XGXXXGGGXXXXXXGXXG 194
G GGG G G
Sbjct: 251 LGGF-GGGPGGFGGGPGG 267
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Frame = +2
Query: 257 PPPPXXXXXXXPXPPXXPPXXXPPPPXXXXXXXPXXPXXP--PPXP 388
PP P PP PP P P P P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/66 (24%), Positives = 16/66 (24%)
Frame = +3
Query: 225 PPPXXXPXXPXPPPXXXXXXXXPXPXXPPPPXXPPXXXXXXXPXXXXPXXXPPXXXXXXX 404
PPP PP P PPPP P PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 405 XXPPPP 422
PPP
Sbjct: 373 GRQPPP 378
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +2
Query: 242 PPXXXPPPPXXXXXXXPXPPXXPPXXXPPPPXXXXXXXPXXPXX--PPPXP 388
PP P P P PP P PP P P P PPP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAP--IAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.5 bits (58), Expect = 4.2
Identities = 29/144 (20%), Positives = 29/144 (20%), Gaps = 6/144 (4%)
Frame = +1
Query: 13 PPXXXPPPXXXXXXXXXXXXXXXXXXPXXXXPXPXPXXXXXPXPPXX----PPXPXXXXP 180
PP PP P P P PP PP P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 181 XXXXXPXXXXXXXXXXXXXXPPXXXPPPPXPXPXPXXXXPXXPPXPXPPPXXXXXXXXXX 360
P PP P P P P P P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Query: 361 XXPXXXP--PXXXXXPPPXPXXXP 426
P P P PP P P
Sbjct: 431 LPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +2
Query: 257 PPPPXXXXXXXPXPPXXPPXXXPPPPXXXXXXXPXXPXXPPP 382
P PP P PP P PP P PPP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 27.5 bits (58), Expect = 4.2
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Frame = +1
Query: 241 PPXXXPP-PPXPXPXPXXXXPXXPPXPXPPPXXXXXXXXXXXXPXXXPPXXXXXPPPXPX 417
PP P PP P P PP P P P P PPP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPL--PPAAPAPPPAPA 481
Query: 418 XXP 426
P
Sbjct: 482 PAP 484
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 387 GXGGGXXGXXGXXXXXXXGGGGXXXGGXXGGXGXXXXXXXGGGGXXXG 244
G GG G G GG G GG GG G G G G
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGG-RGGRGGARGGRGGSSGGRGG 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,733,679
Number of Sequences: 5004
Number of extensions: 30011
Number of successful extensions: 404
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 693525122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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