Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G18
(841 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 238 3e-63
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 238 3e-63
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 238 3e-63
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 238 3e-63
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 238 3e-63
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 238 3e-63
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 238 3e-63
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 238 3e-63
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 238 3e-63
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 232 2e-61
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 227 6e-60
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 126 1e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 1e-23
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 99 4e-21
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 85 8e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 79 3e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 61 1e-09
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 61 1e-09
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.77
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.77
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.77
AF047662-6|AAC04441.1| 185|Caenorhabditis elegans Hypothetical ... 30 2.4
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 9.5
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 9.5
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 9.5
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 9.5
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 9.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 238 bits (583), Expect = 3e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHET+YNS+MKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEA+F LG S
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 238 bits (583), Expect = 3e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHET+YNS+MKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEALF LG S
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 238 bits (583), Expect = 3e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHET+YNS+MKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEA+F LG S
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 238 bits (583), Expect = 3e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHET+YNS+MKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEALF LG S
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 238 bits (583), Expect = 3e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHET+YNS+MKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEALF LG S
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 238 bits (583), Expect = 3e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHET+YNS+MKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEA+F LG S
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 238 bits (583), Expect = 3e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHET+YNS+MKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 219 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 278
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 279 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEALF LG S
Sbjct: 186 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMES 228
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 238 bits (583), Expect = 3e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHET+YNS+MKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 249 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 308
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 309 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEALF LG S
Sbjct: 216 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMES 258
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 238 bits (583), Expect = 3e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHET+YNS+MKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEALF LG S
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 232 bits (568), Expect = 2e-61
Identities = 108/114 (94%), Positives = 112/114 (98%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHET+YNS+MKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
P TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 P-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEA+F LG S
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 227 bits (556), Expect = 6e-60
Identities = 104/114 (91%), Positives = 109/114 (95%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQP+F+GME GIHETTY S+MKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LA
Sbjct: 262 FQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLA 321
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 703 YELPDGQVITIGNXKIPLP 647
YELPDGQVITIGN + P
Sbjct: 240 YELPDGQVITIGNERFRCP 258
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 729 ASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLG 616
ASS SLE P + RFRCPE LF +G
Sbjct: 231 ASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIG 268
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 126 bits (305), Expect = 1e-29
Identities = 56/119 (47%), Positives = 81/119 (68%)
Frame = -3
Query: 650 AQRLXFQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 471
A + F+P +G E G+ S+MKCDVD+R+ LY+N VLSGGTT++ G DR+ E
Sbjct: 256 APEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGE 315
Query: 470 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 316 MRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (257), Expect = 1e-23
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = -3
Query: 563 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 393
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 392 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 297
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 98.7 bits (235), Expect = 4e-21
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 13/123 (10%)
Frame = -3
Query: 650 AQRLXFQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 471
A + FQP + +E G+ E + + D+D R D Y + VLSGGTTMYPG+ R++KE
Sbjct: 261 APEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKE 320
Query: 470 ITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYD 330
+ L A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+
Sbjct: 321 LKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYE 380
Query: 329 ESG 321
E G
Sbjct: 381 EGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 84.6 bits (200), Expect = 8e-17
Identities = 33/100 (33%), Positives = 66/100 (66%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
F+P G++ G+H+ + ++++C +D R+ LY N L+GG ++ PGIA+++++E++ +
Sbjct: 440 FKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVV 499
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 336
P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 500 PNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 79.4 bits (187), Expect = 3e-15
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 17/127 (13%)
Frame = -3
Query: 641 LXFQPSFLGME-ACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 465
+ F P F E I +T + +C +D+R+ LY N VLSGG+TM+ A ++Q+++
Sbjct: 288 IFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVK 347
Query: 464 ALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 333
L+ P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY
Sbjct: 348 RLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEY 407
Query: 332 DESGPSI 312
E GPSI
Sbjct: 408 MERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/121 (25%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Frame = -3
Query: 641 LXFQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 462
+ F PS + ++ CG+ E S+ +C +R L N ++ GG++ +PG +R+++E+ +
Sbjct: 275 ILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRS 334
Query: 461 LAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF* 291
+ P+ + + + P+ W G L L+ + WI+++++DE G S+ F
Sbjct: 335 MLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQ 390
Query: 290 T 288
T
Sbjct: 391 T 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/121 (25%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Frame = -3
Query: 641 LXFQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 462
+ F PS + ++ CG+ E S+ +C +R L N ++ GG++ +PG +R+++E+ +
Sbjct: 275 ILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRS 334
Query: 461 LAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF* 291
+ P+ + + + P+ W G L L+ + WI+++++DE G S+ F
Sbjct: 335 MLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQ 390
Query: 290 T 288
T
Sbjct: 391 T 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 8e-06
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -3
Query: 575 VMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 411
V KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 410 ----YSVWIGGSILASL-STFQQMWISKQEY 333
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCD 470
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCD 470
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCD 470
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AF047662-6|AAC04441.1| 185|Caenorhabditis elegans Hypothetical
protein T22B2.2 protein.
Length = 185
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 532 LAYKSLRMSTSHFMTELYVVSWMPQASIPKNXGWKXSLW 648
LA+K + F+T+L+V+S + A I + GW S W
Sbjct: 121 LAFKLISFIKWDFVTDLFVLSILTSALIGQCSGWANSEW 159
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 235 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 327
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 338 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 237
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 235 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 327
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 419 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 258
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -1
Query: 379 PPSLPSNKCGSRNKSTTSLAPPLYTGSASKRT--ARRCLQQPAAGCS--IQACNP 227
PP+ P K SR STT PP T S K+ + L++ AGC+ QA NP
Sbjct: 1516 PPARPIVK-NSRRPSTTPKPPPNLTCSGCKKILGSDYSLRRHRAGCADVQQALNP 1569
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,457,152
Number of Sequences: 27780
Number of extensions: 328466
Number of successful extensions: 957
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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