Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G16
(832 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting pr... 36 0.14
AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protei... 36 0.14
BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein pr... 36 0.24
BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein. 36 0.24
AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrom... 36 0.24
AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein. 36 0.24
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 34 0.73
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 32 2.2
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 32 2.2
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 32 2.2
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 32 2.2
AL445209-2|CAI15183.1| 726|Homo sapiens chromosome 13 open read... 32 2.2
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 32 2.2
AL139319-1|CAH70397.1| 726|Homo sapiens chromosome 13 open read... 32 2.2
AK023511-1|BAB14594.1| 460|Homo sapiens protein ( Homo sapiens ... 32 2.2
AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein. 32 2.2
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 32 2.2
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 32 2.9
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 32 2.9
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 32 2.9
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 32 2.9
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 32 2.9
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 32 2.9
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 2.9
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 2.9
Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein. 31 3.9
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 31 3.9
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2... 31 3.9
AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2... 31 3.9
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2... 31 3.9
AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2... 31 3.9
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2... 31 3.9
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 31 3.9
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein. 31 3.9
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein. 31 3.9
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro... 31 3.9
AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein. 31 3.9
AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein pro... 31 3.9
AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa varia... 31 5.1
AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa varia... 31 5.1
AK024441-1|BAB15731.1| 188|Homo sapiens FLJ00031 protein protein. 31 5.1
AK024432-1|BAB15722.1| 344|Homo sapiens FLJ00022 protein protein. 31 5.1
AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens ... 31 5.1
AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein... 31 5.1
Z98256-3|CAB10915.2| 580|Homo sapiens synapsin III protein. 31 6.8
Z93242-2|CAI42725.1| 530|Homo sapiens retinoic acid induced 2 p... 31 6.8
Z83846-3|CAB62947.2| 580|Homo sapiens synapsin III protein. 31 6.8
Z82246-1|CAI18775.1| 580|Homo sapiens synapsin III protein. 31 6.8
Z82181-1|CAI18771.1| 580|Homo sapiens synapsin III protein. 31 6.8
Z80902-1|CAI18794.1| 580|Homo sapiens synapsin III protein. 31 6.8
Z71183-1|CAB63144.2| 580|Homo sapiens synapsin III protein. 31 6.8
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 31 6.8
CR456589-1|CAG30475.1| 580|Homo sapiens SYN3 protein. 31 6.8
BC117460-1|AAI17461.1| 579|Homo sapiens synapsin III protein. 31 6.8
BC075066-1|AAH75066.1| 580|Homo sapiens synapsin III protein. 31 6.8
BC075065-1|AAH75065.1| 580|Homo sapiens synapsin III, isoform I... 31 6.8
BC027937-1|AAH27937.1| 530|Homo sapiens RAI2 protein protein. 31 6.8
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 31 6.8
AK124777-1|BAC85943.1| 210|Homo sapiens protein ( Homo sapiens ... 31 6.8
AK000226-1|BAA91021.1| 651|Homo sapiens protein ( Homo sapiens ... 31 6.8
AF301909-1|AAG33495.1| 845|Homo sapiens mu-protocadherin protein. 31 6.8
AF258676-1|AAG16733.1| 845|Homo sapiens MUCDHL-FL protein. 31 6.8
AF258674-2|AAG16731.1| 845|Homo sapiens MUCDHL-FL protein. 31 6.8
AF136587-1|AAD33688.1| 530|Homo sapiens retinoic acid-induced p... 31 6.8
AF046873-1|AAC15101.1| 580|Homo sapiens synapsin IIIa protein. 31 6.8
AB209684-1|BAD92921.1| 611|Homo sapiens Synapsin-3 variant prot... 31 6.8
Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein. 30 8.9
X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein. 30 8.9
CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein. 30 8.9
BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.9
BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.9
BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.9
BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.9
BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.9
BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.9
BC031990-1|AAH31990.1| 156|Homo sapiens C14orf65 protein protein. 30 8.9
BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.9
BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.9
AK026211-1|BAB15395.1| 156|Homo sapiens protein ( Homo sapiens ... 30 8.9
>X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting
protein protein.
Length = 494
Score = 36.3 bits (80), Expect = 0.14
Identities = 26/87 (29%), Positives = 33/87 (37%)
Frame = -1
Query: 724 PXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRST 545
P + N+ REA P P + + PV T P P PLPPS S
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSAPHRPHLRPPPPSRPGPPPLPPSSSG 327
Query: 544 SRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
+ + P R+ S ST S RS
Sbjct: 328 NDETPRLPQRNLSLSSSTPPLPSPGRS 354
>AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protein
protein.
Length = 503
Score = 36.3 bits (80), Expect = 0.14
Identities = 26/87 (29%), Positives = 33/87 (37%)
Frame = -1
Query: 724 PXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRST 545
P + N+ REA P P + + PV T P P PLPPS S
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSAPHRPHLRPPPPSRPGPPPLPPSSSG 327
Query: 544 SRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
+ + P R+ S ST S RS
Sbjct: 328 NDETPRLPQRNLSLSSSTPPLPSPGRS 354
>BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein
protein.
Length = 510
Score = 35.5 bits (78), Expect = 0.24
Identities = 26/87 (29%), Positives = 34/87 (39%)
Frame = -1
Query: 724 PXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRST 545
P + N+ REA P P + + PV T S + P PLPPS S
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSG 327
Query: 544 SRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
+ + P R+ S ST S RS
Sbjct: 328 NDETPRLPQRNLSLSSSTPPLPSPGRS 354
>BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein.
Length = 403
Score = 35.5 bits (78), Expect = 0.24
Identities = 26/87 (29%), Positives = 34/87 (39%)
Frame = -1
Query: 724 PXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRST 545
P + N+ REA P P + + PV T S + P PLPPS S
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSG 327
Query: 544 SRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
+ + P R+ S ST S RS
Sbjct: 328 NDETPRLPQRNLSLSSSTPPLPSPGRS 354
>AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrome
protein interacting protein protein.
Length = 312
Score = 35.5 bits (78), Expect = 0.24
Identities = 26/87 (29%), Positives = 34/87 (39%)
Frame = -1
Query: 724 PXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRST 545
P + N+ REA P P + + PV T S + P PLPPS S
Sbjct: 77 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSG 136
Query: 544 SRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
+ + P R+ S ST S RS
Sbjct: 137 NDETPRLPQRNLSLSSSTPPLPSPGRS 163
>AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 35.5 bits (78), Expect = 0.24
Identities = 26/87 (29%), Positives = 34/87 (39%)
Frame = -1
Query: 724 PXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRST 545
P + N+ REA P P + + PV T S + P PLPPS S
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSG 327
Query: 544 SRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
+ + P R+ S ST S RS
Sbjct: 328 NDETPRLPQRNLSLSSSTPPLPSPGRS 354
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 33.9 bits (74), Expect = 0.73
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = -1
Query: 673 PGRKTSPYPVKYTLXA---QCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLT 503
PG SP P T+ A S S S+ P GT+ P+P +TS + S ++
Sbjct: 128 PGTTPSPVPTTSTIFAPRTSTTSASTTSTTPGPGTTPSPVP---TTSTASVSKTSTSHVS 184
Query: 502 SPSTGHTQSTSRSTCL-CT 449
T H+Q +R L CT
Sbjct: 185 ISKTTHSQPVTRDCHLRCT 203
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 32.3 bits (70), Expect = 2.2
Identities = 22/77 (28%), Positives = 31/77 (40%)
Frame = -1
Query: 670 GRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPST 491
G +T+P PV T P+ S S+ TSA + T P S ++P+T
Sbjct: 51 GPETTPRPVPTTSTTSSPTTSTTSAPTTSTTSASTTSTTSGAGTTPSPVPTTSTTSAPTT 110
Query: 490 GHTQSTSRSTCLCTLRS 440
T + ST T S
Sbjct: 111 RTTSAPISSTTSATTTS 127
Score = 31.9 bits (69), Expect = 2.9
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -1
Query: 670 GRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KR-PCRSQLTSPS 494
G T+P PV T P+ +R +S P+ T++ + S T + P S +SP+
Sbjct: 11 GPGTTPSPVPTTSTTSAPT-TRTTSAPKSSTTSAATTSTTSGPETTPRPVPTTSTTSSPT 69
Query: 493 TGHTQSTSRST 461
T T + + ST
Sbjct: 70 TSTTSAPTTST 80
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 583 GTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
GT+ SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 435 GTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
R+ + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 583 GTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
GT+ SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 435 GTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
R+ + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 583 GTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
GT+ SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 435 GTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
R+ + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>AL445209-2|CAI15183.1| 726|Homo sapiens chromosome 13 open reading
frame 7 protein.
Length = 726
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 586 QGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCT 449
QG SAR P S ++S + +P S+L S+ +STS++ C+
Sbjct: 294 QGDSARKQPGSSTSSSSHLAKPSSSRLCDTSSARQESTSKADLNCS 339
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 583 GTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
GT+ SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 435 GTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
R+ + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>AL139319-1|CAH70397.1| 726|Homo sapiens chromosome 13 open reading
frame 7 protein.
Length = 726
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 586 QGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCT 449
QG SAR P S ++S + +P S+L S+ +STS++ C+
Sbjct: 294 QGDSARKQPGSSTSSSSHLAKPSSSRLCDTSSARQESTSKADLNCS 339
>AK023511-1|BAB14594.1| 460|Homo sapiens protein ( Homo sapiens
cDNA FLJ13449 fis, clone PLACE1003025. ).
Length = 460
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 586 QGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCT 449
QG SAR P S ++S + +P S+L S+ +STS++ C+
Sbjct: 28 QGDSARKQPGSSTSSSSHLAKPSSSRLCDTSSARQESTSKADLNCS 73
>AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein.
Length = 372
Score = 32.3 bits (70), Expect = 2.2
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Frame = -1
Query: 673 PGRKTSPYPVKYTLXA---QCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLT 503
PG SP P T A S S AS+ GTS P+P + +TS T
Sbjct: 88 PGTTPSPVPTTSTTSAPTTSTTSASTASTTSGPGTSLSPVPTTSTTSAPT-TSTTSGPGT 146
Query: 502 SPSTGHTQSTSRSTCLCTLRSPYRT 428
+PS T ST+ + T P T
Sbjct: 147 TPSPVPTTSTTSAPTTSTTSGPGTT 171
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 583 GTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
GT+ SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 360 GTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 414
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
R+ + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 106 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 164
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -1
Query: 670 GRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP--PSRSTSRTQ*KRPCRSQLTSP 497
G T+P PV T P+ S +S P T++ P PS T+ T P S ++P
Sbjct: 34 GPGTTPSPVPTTSTTSAPTTS-TTSAPTTSTTSAPTTSTPSAPTTSTT-LAPTTSTTSAP 91
Query: 496 STGHTQSTSRST 461
+T T + + ST
Sbjct: 92 TTSTTSTPTSST 103
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 697 PRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTS 542
PRR P R+ SP P +Y+ Q S P++ T++ P PP R S
Sbjct: 577 PRRRTPSPPPRRRSPSPRRYSPPIQ--RRYSPSPPPKRRTASPPPPPKRRAS 626
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 697 PRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTS 542
PRR P R+ SP P +Y+ Q S P++ T++ P PP R S
Sbjct: 577 PRRRTPSPPPRRRSPSPRRYSPPIQ--RRYSPSPPPKRRTASPPPPPKRRAS 626
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 697 PRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTS 542
PRR P R+ SP P +Y+ Q S P++ T++ P PP R S
Sbjct: 586 PRRRTPSPPPRRRSPSPRRYSPPIQ--RRYSPSPPPKRRTASPPPPPKRRAS 635
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 697 PRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTS 542
PRR P R+ SP P +Y+ Q S P++ T++ P PP R S
Sbjct: 577 PRRRTPSPPPRRRSPSPRRYSPPIQ--RRYSPSPPPKRRTASPPPPPKRRAS 626
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 697 PRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTS 542
PRR P R+ SP P +Y+ Q S P++ T++ P PP R S
Sbjct: 586 PRRRTPSPPPRRRSPSPRRYSPPIQ--RRYSPSPPPKRRTASPPPPPKRRAS 635
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 697 PRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTS 542
PRR P R+ SP P +Y+ Q S P++ T++ P PP R S
Sbjct: 575 PRRRTPSPPPRRRSPSPRRYSPPIQ--RRYSPSPPPKRRTASPPPPPKRRAS 624
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 697 PRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTS 542
PRR P R+ SP P +Y+ Q S P++ T++ P PP R S
Sbjct: 575 PRRRTPSPPPRRRSPSPRRYSPPIQ--RRYSPSPPPKRRTASPPPPPKRRAS 624
>Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein.
Length = 94
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = -1
Query: 670 GRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPST 491
G T+P PV T P+ S S+ TSA + T P S ++P+T
Sbjct: 23 GPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTT 82
Query: 490 GHTQSTSRST 461
T +++ ST
Sbjct: 83 STTSASTTST 92
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 892 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 938
>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1377
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 890 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 268 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 888 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 268 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 888 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = -1
Query: 628 AQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
A+C R S PR+ +R SRS SR++ R RS+ S + ++STS+S
Sbjct: 90 ARCGGYGRRSRSPRRRRRSRSRSRSRSRSRSR-SRYSRSKSRSRTRSRSRSTSKS 143
>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 890 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 890 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
protein.
Length = 1113
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 626 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 672
>AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein.
Length = 699
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 618 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 664
>AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein
protein.
Length = 757
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
P PV H+ PV VP PV +PV P P+ + +P IE+
Sbjct: 270 PVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 316
>AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 507
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 466 FSMWTGYGLSTGMLTGNGTAFSTGYG 543
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 508
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 466 FSMWTGYGLSTGMLTGNGTAFSTGYG 543
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK024441-1|BAB15731.1| 188|Homo sapiens FLJ00031 protein protein.
Length = 188
Score = 31.1 bits (67), Expect = 5.1
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = -1
Query: 664 KTSPYPVKYTLXAQCPSMS---RASSVPRQGTSARPLPPSRST--SRTQ*KRPCRSQLTS 500
+T P +YT + SM R VPR S++P PS+S+ S P LT
Sbjct: 37 RTKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPRHISLTL 96
Query: 499 PSTGHTQSTSRS 464
P+T ++++R+
Sbjct: 97 PATFRGRNSTRT 108
>AK024432-1|BAB15722.1| 344|Homo sapiens FLJ00022 protein protein.
Length = 344
Score = 31.1 bits (67), Expect = 5.1
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = -1
Query: 664 KTSPYPVKYTLXAQCPSMS---RASSVPRQGTSARPLPPSRST--SRTQ*KRPCRSQLTS 500
+T P +YT + SM R VPR S++P PS+S+ S P LT
Sbjct: 193 RTKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPRHISLTL 252
Query: 499 PSTGHTQSTSRS 464
P+T ++++R+
Sbjct: 253 PATFRGRNSTRT 264
>AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ10655 fis, clone NT2RP2005933, weakly similar to
NUCLEOPORIN NUP57. ).
Length = 484
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 466 FSMWTGYGLSTGMLTGNGTAFSTGYG 543
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein
protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 466 FSMWTGYGLSTGMLTGNGTAFSTGYG 543
F TG+G +TG TG GT TG G
Sbjct: 60 FGFGTGFGTTTGTSTGLGTGLGTGLG 85
>Z98256-3|CAB10915.2| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 429 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 486
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
>Z93242-2|CAI42725.1| 530|Homo sapiens retinoic acid induced 2
protein.
Length = 530
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 572 PPLTPVEKHIPYPVEKAVPFPVNIPVDRPYP 480
P + P +PYPV +P PV IP+ P P
Sbjct: 223 PLVPPATLLVPYPVIVPLPVPVPIPIPIPMP 253
>Z83846-3|CAB62947.2| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 429 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 486
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
>Z82246-1|CAI18775.1| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 429 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 486
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
>Z82181-1|CAI18771.1| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 429 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 486
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
>Z80902-1|CAI18794.1| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 429 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 486
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
>Z71183-1|CAB63144.2| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 429 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 486
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
R+ + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 556 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>CR456589-1|CAG30475.1| 580|Homo sapiens SYN3 protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 429 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 486
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
>BC117460-1|AAI17461.1| 579|Homo sapiens synapsin III protein.
Length = 579
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 428 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 485
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 486 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 518
>BC075066-1|AAH75066.1| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 429 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 486
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
>BC075065-1|AAH75065.1| 580|Homo sapiens synapsin III, isoform IIIa
protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 429 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 486
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
>BC027937-1|AAH27937.1| 530|Homo sapiens RAI2 protein protein.
Length = 530
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 572 PPLTPVEKHIPYPVEKAVPFPVNIPVDRPYP 480
P + P +PYPV +P PV IP+ P P
Sbjct: 223 PLVPPATLLVPYPVIVPLPVPVPIPIPIPVP 253
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
R+ + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>AK124777-1|BAC85943.1| 210|Homo sapiens protein ( Homo sapiens
cDNA FLJ42787 fis, clone BRAWH3006792. ).
Length = 210
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 679 PXPGRKTSPYPV-KYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLT 503
P P P+P+ T AQ ++++ R+G R +PP SR KR CR++
Sbjct: 52 PSPLPPPPPHPIPSSTTSAQAWLLAKSRHRGRRGRGKRMIPPQNGVSRK--KRECRARRD 109
Query: 502 SPSTG 488
S G
Sbjct: 110 SWGRG 114
>AK000226-1|BAA91021.1| 651|Homo sapiens protein ( Homo sapiens
cDNA FLJ20219 fis, clone COLF3371. ).
Length = 651
Score = 30.7 bits (66), Expect = 6.8
Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = -1
Query: 718 QIPNQXXPRREAXPXP--GRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRST 545
Q+ Q P + P P G T P+ + + P S+ S G P PPS +T
Sbjct: 284 QVSEQEPPSTDVPPSPEAGGTTGPWTGTTSEVPRPPEPSQGPSTTSSGEGTGPHPPSGTT 343
Query: 544 SRTQ*KRPCRSQLTSPSTGHTQSTS 470
RP S S G STS
Sbjct: 344 -----LRPPTSSTPGGSPGAENSTS 363
>AF301909-1|AAG33495.1| 845|Homo sapiens mu-protocadherin protein.
Length = 845
Score = 30.7 bits (66), Expect = 6.8
Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = -1
Query: 718 QIPNQXXPRREAXPXP--GRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRST 545
Q+ Q P + P P G T P+ + + P S+ S G P PPS +T
Sbjct: 450 QVSEQEPPSTDVPPSPEAGGTTGPWTGTTSEVPRPPEPSQGPSTTSSGEGTGPHPPSGTT 509
Query: 544 SRTQ*KRPCRSQLTSPSTGHTQSTS 470
RP S S G STS
Sbjct: 510 -----LRPPTSSTPGGSPGAENSTS 529
>AF258676-1|AAG16733.1| 845|Homo sapiens MUCDHL-FL protein.
Length = 845
Score = 30.7 bits (66), Expect = 6.8
Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = -1
Query: 718 QIPNQXXPRREAXPXP--GRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRST 545
Q+ Q P + P P G T P+ + + P S+ S G P PPS +T
Sbjct: 450 QVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTT 509
Query: 544 SRTQ*KRPCRSQLTSPSTGHTQSTS 470
RP S S G STS
Sbjct: 510 -----LRPPTSSTPGGSPGAENSTS 529
>AF258674-2|AAG16731.1| 845|Homo sapiens MUCDHL-FL protein.
Length = 845
Score = 30.7 bits (66), Expect = 6.8
Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = -1
Query: 718 QIPNQXXPRREAXPXP--GRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRST 545
Q+ Q P + P P G T P+ + + P S+ S G P PPS +T
Sbjct: 450 QVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTT 509
Query: 544 SRTQ*KRPCRSQLTSPSTGHTQSTS 470
RP S S G STS
Sbjct: 510 -----LRPPTSSTPGGSPGAENSTS 529
>AF136587-1|AAD33688.1| 530|Homo sapiens retinoic acid-induced
protein protein.
Length = 530
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 572 PPLTPVEKHIPYPVEKAVPFPVNIPVDRPYP 480
P + P +PYPV +P PV IP+ P P
Sbjct: 223 PLVPPATLLVPYPVIVPLPVPVPIPIPIPVP 253
>AF046873-1|AAC15101.1| 580|Homo sapiens synapsin IIIa protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 429 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 486
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
>AB209684-1|BAD92921.1| 611|Homo sapiens Synapsin-3 variant
protein.
Length = 611
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = -1
Query: 739 MGQXYPXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLP 560
+GQ P P Q PR+ P P R SP + + Q P +S S P+Q S
Sbjct: 460 LGQPQPRP-PPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP-LSPQSGSPQQQRSPGSPQ 517
Query: 559 PSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SR++S + + + T S RST
Sbjct: 518 LSRASSGSSPNQASKPGATLASQPRPPVQGRST 550
>Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein.
Length = 513
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGY 540
+S CT T WTGY ST LT +S G+
Sbjct: 404 YSSCTVTTVQPWTGYPTSTSPLTSPRGPWSLGW 436
>X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC031990-1|AAH31990.1| 156|Homo sapiens C14orf65 protein protein.
Length = 156
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -1
Query: 685 AXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ 533
A P +T P+P+K A P + SS R G + PP TQ
Sbjct: 3 AQSGPLPQTEPWPLKVDSEAAAPPAASVSSQARSGKGFKSKPPGSCVRSTQ 53
>BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>AK026211-1|BAB15395.1| 156|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22558 fis, clone HSI01557. ).
Length = 156
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -1
Query: 685 AXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ 533
A P +T P+P+K A P + SS R G + PP TQ
Sbjct: 3 AQSGPLPQTEPWPLKVDSEAAAPPAASVSSQARSGKGFKSKPPGSCVRSTQ 53
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,343,690
Number of Sequences: 237096
Number of extensions: 1401646
Number of successful extensions: 4964
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 4081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4825
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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