Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G13
(790 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 42 1e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 40 4e-04
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 39 0.001
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 37 0.003
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 36 0.005
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 36 0.009
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 33 0.062
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 33 0.062
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 33 0.062
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 32 0.081
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 31 0.25
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 28 1.8
SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1 |S... 26 5.4
SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr 2... 26 5.4
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 26 7.1
SPBC1711.04 |||methylenetetrahydrofolate reductase |Schizosaccha... 25 9.4
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -1
Query: 364 FHACGKAYTTKKTLEGHVRSHTGERPFAC--TRCPSTF 257
+ CGK Y+ LE H+R+H+ ERPF C T C F
Sbjct: 27 YEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAF 64
Score = 31.9 bits (69), Expect = 0.11
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 364 FHACGKAYTTKKTLEGHVRSHTGERPFAC 278
+ C KA+ K L+ H R HT +PF+C
Sbjct: 57 YTGCSKAFYRKSHLKIHKRCHTNVKPFSC 85
Score = 29.9 bits (64), Expect = 0.43
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 364 FHACGKAYTTKKTLEGHVRSHTGERPFACT 275
+ C + T++ LE H+ H +P+ACT
Sbjct: 87 YDGCDAQFYTQQHLERHIEVHRKPKPYACT 116
Score = 29.1 bits (62), Expect = 0.76
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = -1
Query: 466 CSVSGCEFACPSXXXXXXXXXXXXXXXXXXRNHVFHACGKAYTTKKTLEGHVRS-HTGER 290
CS+ G +F + + C K++T L+ H+ H G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 289 PFACTRCPSTFRYE 248
F C C + F Y+
Sbjct: 266 AFHCDSCGTKFGYK 279
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 39.9 bits (89), Expect = 4e-04
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 364 FHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
F C K++T K+ H RSHT + F C C S+F
Sbjct: 21 FQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSF 56
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 38.7 bits (86), Expect = 0.001
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 364 FHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
F C K +T L+ H+ +HT RPF C+ C +F
Sbjct: 574 FAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSF 609
Score = 29.1 bits (62), Expect = 0.76
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
C K++ + H + HTG + FAC C F
Sbjct: 605 CKKSFARQHDKRRHEQLHTGIKAFACVTCNQRF 637
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 37.1 bits (82), Expect = 0.003
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 370 HVFHACGKAYTTKKTLEGHVRSHTGERPFACT 275
+V C +A+ + L+ H+RSHT E+PF C+
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCS 101
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -3
Query: 575 PAKLK-YACELCDKKFVKAARLEEH 504
P K+K Y CE C + F + L+ H
Sbjct: 64 PQKVKQYVCETCTRAFARLEHLKRH 88
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 36.3 bits (80), Expect = 0.005
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -1
Query: 367 VFHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
+++ C K K +E H+++H +RP+ C C + F
Sbjct: 446 LYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGF 482
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 35.5 bits (78), Expect = 0.009
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 352 GKAYTTKKTLEGHVRSHTGERPFACT--RCPSTF 257
G T++ L H+RSHTGE+PF C+ C +F
Sbjct: 84 GMVQTSRFALVAHLRSHTGEKPFICSVPECDRSF 117
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 545 CDKKFVKAARLEEHNMAVHPEDS 477
CD+ F ++ L +H VH D+
Sbjct: 113 CDRSFTRSDALAKHMRTVHEADT 135
Score = 21.0 bits (42), Expect(2) = 4.5
Identities = 9/37 (24%), Positives = 15/37 (40%)
Frame = -3
Query: 650 HHCDMNFKNEMSYYQHMKYNLKHVDPAKLKYACELCD 540
HH + + ++ L H+ + KY CE D
Sbjct: 43 HHIHNGTTSNLRLISNINSILDHIGNRRPKYTCEWDD 79
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 32.7 bits (71), Expect = 0.062
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACT 275
C + + ++ H+RSHTGE+PF C+
Sbjct: 9 CKRVFHRQEHQVRHIRSHTGEKPFECS 35
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 32.7 bits (71), Expect = 0.062
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACT 275
C KA+ + H+R+HTGE+P CT
Sbjct: 31 CTKAFYRLEHQTRHIRTHTGEKPHVCT 57
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 32.7 bits (71), Expect = 0.062
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFAC 278
C + ++ +L+ H SHTGERPF C
Sbjct: 473 CLQGFSRPSSLKIHTYSHTGERPFVC 498
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 32.3 bits (70), Expect = 0.081
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
C K++T K+ L H R+H + F+C+ C F
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAF 65
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRS-HTGERPFAC 278
C K + + L H+RS HT E+PF C
Sbjct: 428 CSKKFKRSEHLRRHIRSLHTSEKPFVC 454
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -3
Query: 575 PAKLKYACELCDKKFVKAARLEEHNMAVHPED 480
P + C C KKF ++ L H ++H +
Sbjct: 418 PGGKSFVCPECSKKFKRSEHLRRHIRSLHTSE 449
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 638 MNFKNEMSYY-QHMKYNL-KHVDPAKLKYACELCDKKFVKAARLEEHNMAVHPEDSA 474
+ +KN+ SY ++ K + KHVD LK+ L + K L + +H +DS+
Sbjct: 441 VGYKNDRSYVVRNNKIGVFKHVDEKGLKFQTALNNLSTPKGKSLRPSKLMLHNQDSS 497
>SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 445
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 563 KYACELCDKKFVKAAR-LEEHNMAV 492
+YAC++ DKK + R E+H M +
Sbjct: 185 QYACKIIDKKKISTKRFFEDHEMTI 209
>SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 825
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 337 TKKTLEGHVRSHTGERPFACTRCPSTFRYEAXPVQPQQA 221
T+ T+EG+ T PF C +T RY + Q A
Sbjct: 736 TRVTMEGYREEGTTTTPFNMMMCNNTSRYHVARMALQHA 774
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 560 YACELCDKKFVKAARLEEHNMAVH 489
+ C+ CD FVK + L H H
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTYH 162
>SPBC1711.04 |||methylenetetrahydrofolate reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 614 YYQHMKYNLKHVDPAKLKYACELC 543
Y +M +N++H+DP K K + C
Sbjct: 129 YVMNMYHNIRHLDPEKTKKSILPC 152
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,256,153
Number of Sequences: 5004
Number of extensions: 34928
Number of successful extensions: 153
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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