Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G13
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 39 0.005
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 37 0.016
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 36 0.049
09_02_0366 + 7941550-7942161,7942230-7942775 34 0.11
05_05_0022 + 21592403-21593083,21593720-21594208 33 0.20
07_03_1104 + 24001594-24002139 33 0.26
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 33 0.26
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 33 0.34
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 32 0.60
03_06_0217 - 32432590-32433495 32 0.60
01_06_1412 - 37140654-37141088,37141549-37142214 32 0.60
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 31 0.79
07_03_1165 - 24459156-24460139 31 1.4
01_06_1614 - 38648495-38649706 29 3.2
12_02_0916 - 24271151-24271894 29 5.6
10_08_0596 + 19078153-19078440,19078802-19079068 29 5.6
07_03_1151 + 24385272-24386543 29 5.6
04_04_0734 + 27648661-27649596 29 5.6
03_04_0134 - 17593449-17594702 29 5.6
02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875 29 5.6
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 28 9.7
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 28 9.7
06_03_1478 - 30420097-30420651 28 9.7
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 28 9.7
02_05_0201 + 26687369-26689228 28 9.7
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 38.7 bits (86), Expect = 0.005
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = -1
Query: 364 FHACGKAYTTKKTLEGHVRSH--TGERPFACTRCPSTFRYE--AXPVQPQQA-GARGAAE 200
F ACGK +T+ L+ HV+ H TG P PS+ + + + P P AA
Sbjct: 180 FPACGKRFTSDSKLKSHVKGHEKTG-TPITAQYVPSSDKPQSSSKPATPATTKPTTPAAT 238
Query: 199 DVATPGASIPTVLTPELMSRQRSISTYRHC--ELISRYKL 86
TP ++ PT P + + + Y C I YKL
Sbjct: 239 KTTTPASTKPTTPAPTSFAERPYVCPYDGCGKAYIHSYKL 278
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFAC 278
CGK + L+ H HTG++ F C
Sbjct: 123 CGKKFVDSSKLKRHHLIHTGQKDFIC 148
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 358 ACGKAYTTKKTLEGHVRSHTGERPFAC--TRCPSTFRY 251
+CGK +++ K L+ H H ERPF C CP TF++
Sbjct: 823 SCGKRFSSHKYLKRHQCVHRDERPFKCPWDGCPMTFKW 860
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = -1
Query: 316 HVRSHTGERPFACTR--CPSTFRY 251
H+R HTGERP+ C+ C +FRY
Sbjct: 867 HIRVHTGERPYKCSAPDCGQSFRY 890
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 35.5 bits (78), Expect = 0.049
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 373 NHVFHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
NH+ H + +TL+ H R G R FAC RC F
Sbjct: 219 NHIDHPRARPLKDFRTLQTHYRRRHGARDFACRRCAKRF 257
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 373 NHVFHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
N+V H + +TL+ H R G RP+AC RC F
Sbjct: 250 NNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRCGKRF 288
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 373 NHVFHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
N+V H + +TL+ H + G +PFAC RC F
Sbjct: 269 NNVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRCAKPF 307
>07_03_1104 + 24001594-24002139
Length = 181
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFRYEAXPVQPQQAGARGAAEDVAT 188
CGKA+ + + L GH SH +P A P R P +G A D A+
Sbjct: 32 CGKAFASYQALGGHKASH--RKPSAAAAAPPAHRDVVVAAAPASSGRVAADADAAS 85
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACTR--CPSTFRY 251
C A+ H+R HTG+RP+ C C TFR+
Sbjct: 1146 CNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRF 1182
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFAC 278
CGK + + K L H + HT +RP C
Sbjct: 1116 CGKKFFSHKYLLQHRKVHTDDRPLTC 1141
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACTR--CPSTFRY 251
C KA+ H+R HTG RP+ C C TFR+
Sbjct: 1290 CKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRF 1326
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -3
Query: 656 YXHHCDMNFKNEMSYYQHMKYNLKHVDPAKLKYACELCDKKFVKAARLEEHNMAVHPE 483
+ ++CD F +E QH K KH + C +C KK A + H + VH E
Sbjct: 12 FCYYCDREFDDEKILVQHQK--AKH-------FKCHVCHKKLSTAGGMAIHVLQVHKE 60
>03_06_0217 - 32432590-32433495
Length = 301
Score = 31.9 bits (69), Expect = 0.60
Identities = 22/67 (32%), Positives = 27/67 (40%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFRYEAXPVQPQQAGARGAAEDVATPGAS 176
C K + + L GH +H ER Y P P AG AA ATPG
Sbjct: 54 CNKKFLKSQALGGHQNAHKKERSIGWN------PYFYMPPTPHPAGNAAAAAAAATPG-G 106
Query: 175 IPTVLTP 155
+ +V TP
Sbjct: 107 MSSVTTP 113
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 373 NHVFHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
N+V H + +TL+ H + G +PF C RC F
Sbjct: 261 NNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCRRCAKPF 299
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -1
Query: 373 NHVFHACGKAYTTKKTLEGHVRSHTGERPFAC--TRCPSTF 257
+H CG ++ L+ H++SH+ ER F C CP ++
Sbjct: 59 DHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSY 99
>07_03_1165 - 24459156-24460139
Length = 327
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 361 HACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFRYEAXPVQPQ-QAGARGAA 203
H C K + ++K + GH+R H E P A PV PQ + RGA+
Sbjct: 116 HLCNKEFGSRKAVHGHMRVHHAENEKEPMSLPPQV---AAPVHPQARLPTRGAS 166
>01_06_1614 - 38648495-38649706
Length = 403
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 373 NHVFHACGKAYTTKKTLEGHVRSH 302
NH CGK ++T L GH+R H
Sbjct: 291 NHPCKTCGKEFSTGVALGGHMRKH 314
Score = 28.3 bits (60), Expect = 7.4
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 361 HACGKAYTTKKTLEGHVRSHTGER 290
H C K + ++K + GH+R H ++
Sbjct: 108 HVCSKEFGSRKAVHGHMRVHQADK 131
>12_02_0916 - 24271151-24271894
Length = 247
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 370 HVFHACGKAYTTKKTLEGHVRSH 302
H + CGKA+ T + L GH R H
Sbjct: 155 HECNVCGKAFPTGQALGGHKRCH 177
>10_08_0596 + 19078153-19078440,19078802-19079068
Length = 184
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 135 RCRDISSGVSTVGMEAPGVATSSAAPRAPA-CC 230
RCR + + G+++ G +T AAP APA CC
Sbjct: 7 RCRQAPTAAAPAGLDSGGRST-EAAPAAPAKCC 38
>07_03_1151 + 24385272-24386543
Length = 423
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 370 HVFHACGKAYTTKKTLEGHVRSH 302
H CGK ++ ++L GH+RSH
Sbjct: 13 HRCRVCGKGFSCGRSLGGHMRSH 35
>04_04_0734 + 27648661-27649596
Length = 311
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 358 ACGKAYTTKKTLEGHVRSH-TGERPFACTRCPSTFRYEAXPVQPQQAGARGAAEDVATP 185
AC K + + + L GH SH G R C P+ A P+QP G E+ A P
Sbjct: 178 ACKKVFRSYQALGGHRASHMRGGRGGCCAPPPNPPPSPATPLQPLPE-CDGGEEEGAKP 235
>03_04_0134 - 17593449-17594702
Length = 417
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 370 HVFHACGKAYTTKKTLEGHVRSHT 299
H CGK + ++L GH+RSH+
Sbjct: 17 HSCKVCGKGFACGRSLGGHMRSHS 40
>02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875
Length = 356
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 164 HRRDGGTWSRYVFCRAACTSLLWLYRXRFVSEGRGAARAREGPLAGVR 307
HR G W+ +FC++ C S S GR ARARE +G R
Sbjct: 244 HRVRGNWWTSCIFCKSFCRS----------SGGRSRARARERRSSGRR 281
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -1
Query: 361 HACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFR-YEAXPVQPQQAGARGAAED 197
HA G KK R H+G R +AC RC + + + G RG + D
Sbjct: 122 HALGDLVGIKKHFR---RKHSGHRQWACARCSKAYAVHSDYKAHLKTCGTRGHSCD 174
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 361 HACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
HA G KK R H+G R +AC+RC +
Sbjct: 121 HALGDLVGIKKHFR---RKHSGHRQWACSRCSKAY 152
>06_03_1478 - 30420097-30420651
Length = 184
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSHTG 296
C + + T+K + GH+RSH G
Sbjct: 61 CDRHFPTEKAVHGHMRSHPG 80
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 355 CGKAYTTKKTLEGHVRSH 302
CGK + + K + GH+RSH
Sbjct: 193 CGKVFMSDKAMYGHLRSH 210
>02_05_0201 + 26687369-26689228
Length = 619
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -1
Query: 358 ACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFRYEAXPVQPQQAGARGAAED 197
AC K +T+ + L GH SH + + S+ R E Q QQ A D
Sbjct: 300 ACKKVFTSHQALGGHRASHKKVKGCFAAKLESS-RNETSQTQTQQQHVSAAPHD 352
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,451,695
Number of Sequences: 37544
Number of extensions: 272481
Number of successful extensions: 1083
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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