Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_G12
         (844 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0324 + 16803652-16803990,16804001-16804054,16804264-168042...    31   1.1  
09_06_0132 - 21042653-21042873,21042950-21043027,21043106-210431...    30   2.7  
08_01_0415 + 3687998-3688096,3688326-3688520,3689219-3689385,368...    29   6.1  
09_04_0430 + 17502387-17503505                                         28   8.1  
06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991     28   8.1  

>07_03_0324 +
           16803652-16803990,16804001-16804054,16804264-16804269,
           16804657-16804731,16804864-16804983,16806571-16806762,
           16806994-16807077,16807167-16807256,16807832-16807885,
           16808006-16808085,16808523-16808633,16808707-16808761,
           16808799-16808858
          Length = 439

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 435 CTYGRVPRRRVPPWLYVARSGTALAGRRSVLV 340
           C  GR PRRR PP L VA +  A  G  + L+
Sbjct: 40  CARGRQPRRRAPPPLAVAAAEEAYTGAETELL 71


>09_06_0132 -
           21042653-21042873,21042950-21043027,21043106-21043167,
           21043504-21043578,21043664-21043752,21043825-21043905,
           21044939-21045076,21046299-21046429,21046521-21046592,
           21047218-21047275,21047362-21047461,21047544-21047617,
           21047701-21047836,21047913-21048137,21048211-21048446,
           21048949-21049081,21049195-21049484
          Length = 732

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -3

Query: 515 VDDTARLTRVSPRSALTYLPVNRTDCG-VHTGASLGDASPPGCTSLARGPRS 363
           V+D   LT  S +S +   P+    CG V TG+ LG A+P G   L    +S
Sbjct: 197 VEDVLYLTSDSAQSKIVTAPI-MFGCGQVQTGSFLGSAAPNGLLGLGMDSKS 247


>08_01_0415 +
           3687998-3688096,3688326-3688520,3689219-3689385,
           3689459-3689509,3689576-3689657,3689764-3689832,
           3689939-3690109
          Length = 277

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +3

Query: 237 ASNVTYV*SPNRHCTLVDTLHVPPPQL 317
           A+ ++   +P++HC++V   H PPP +
Sbjct: 2   AATLSSAPAPSKHCSIVRAQHSPPPSI 28


>09_04_0430 + 17502387-17503505
          Length = 372

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -1

Query: 742 RRWHKQPPXXXKQVQARASVVPQPTXRGKFPXPRRTPPGAVP 617
           R +H  PP   +Q Q +    P P      P P R PP + P
Sbjct: 155 RAYH--PPAPMQQPQPQPPPQPTPPRAAPLPTPPRAPPQSTP 194


>06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991
          Length = 276

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = -1

Query: 787 PAXXPXXGGAHPXGNRRWHKQPPXXXKQVQARASVVPQP-TXRGKFPXPRRTPPGAVPS 614
           P+  P     H    R  H+QPP   +  +   SV   P   + KF  P +  P   PS
Sbjct: 65  PSSRPATSSGHRESQRH-HQQPPGSHQHHRRSGSVASDPGDFQSKFAPPPQFRPSPSPS 122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,043,184
Number of Sequences: 37544
Number of extensions: 316747
Number of successful extensions: 1239
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)