Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G08
(775 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 120 2e-28
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 118 9e-28
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 89 7e-19
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 67 2e-12
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 64 2e-11
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.034
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.079
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 31 0.18
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 31 0.24
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.32
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 30 0.32
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.42
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 29 0.98
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.98
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.7
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 1.7
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 27 2.3
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.0
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.9
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 3.9
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 3.9
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 3.9
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 26 5.2
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.2
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 5.2
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.9
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 6.9
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 6.9
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 6.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 6.9
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 9.1
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.1
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 25 9.1
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 120 bits (290), Expect = 2e-28
Identities = 54/99 (54%), Positives = 75/99 (75%)
Frame = -3
Query: 527 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 348
KEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+ I
Sbjct: 510 KEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAID 569
Query: 347 DKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKM 231
+TI+WLD N A K+EYE KQKELEG+ NPI+ K+
Sbjct: 570 KAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKI 608
Score = 94.3 bits (224), Expect = 2e-20
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = -2
Query: 675 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSQ 526
GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLS+
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSK 510
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 118 bits (284), Expect = 9e-28
Identities = 53/99 (53%), Positives = 75/99 (75%)
Frame = -3
Query: 527 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 348
KEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+T+
Sbjct: 510 KEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVD 569
Query: 347 DKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKM 231
+TI+WLDSN A K+E+E KQKELE + NPI+ K+
Sbjct: 570 KAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKI 608
Score = 94.3 bits (224), Expect = 2e-20
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = -2
Query: 675 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSQ 526
GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLS+
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSK 510
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 89.0 bits (211), Expect = 7e-19
Identities = 42/101 (41%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Frame = -3
Query: 527 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTI 351
+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L K+ DKQ +
Sbjct: 540 EEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAV 599
Query: 350 LDKCNDTIKWLD-SNQLADKEEYEHKQKELEGIYNPIITKM 231
LD D +WL+ + A KEE+E ++++L+ + +PI K+
Sbjct: 600 LDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKL 640
Score = 80.6 bits (190), Expect = 2e-16
Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = -2
Query: 714 KDNNLXR*IXS*PGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKG 538
KDNNL GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKG
Sbjct: 478 KDNNLLGKFDL-RGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKG 536
Query: 537 RLSQ 526
RLS+
Sbjct: 537 RLSE 540
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/46 (60%), Positives = 38/46 (82%)
Frame = -2
Query: 675 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKG 538
GI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G
Sbjct: 504 GIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG 549
Score = 43.2 bits (97), Expect = 4e-05
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = -3
Query: 521 EIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKEKISDSDKQTIL 348
EIE MV +AEKYR D +KE I+ N ES C ++S ++ +KL ++ + + I
Sbjct: 554 EIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKIT 613
Query: 347 DKCNDTIKWLDSNQLADKEEYEHKQKELE 261
D K ++ E+ + K E++
Sbjct: 614 DLRETVAKVNAGDEGITSEDMKKKIDEIQ 642
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 64.1 bits (149), Expect = 2e-11
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -2
Query: 675 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 529
GIPP PRG ++E TF++DANGIL V+A+EK+T + I ITN G LS
Sbjct: 466 GIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLS 514
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 33.5 bits (73), Expect = 0.034
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Frame = -3
Query: 530 PKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EKLKEKISDSDK 360
P E +E+ EAE DK ET+ KNALE Y + ++ ++D + S
Sbjct: 552 PTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAPFTNEEESSKF 610
Query: 359 QTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGIYNPI 243
+ +L K D WL + + K Y K ++L + PI
Sbjct: 611 KEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.079
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -3
Query: 524 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 345
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 344 K 342
K
Sbjct: 79 K 79
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 31.1 bits (67), Expect = 0.18
Identities = 28/111 (25%), Positives = 46/111 (41%)
Frame = -3
Query: 524 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 345
E+ + E EK + +A+ A + +E EK KEK D D++
Sbjct: 230 EDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQKDKDQE---- 285
Query: 344 KCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMXPGCRRSPRRYAG 192
DT+ D NQ+ D+ E K+ + E + P + + P + P R G
Sbjct: 286 --QDTVS--DKNQI-DEIEKGQKEVDEEPVSEPTTSPILPPKNQEPIRMGG 331
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -1
Query: 613 RYPQRFRYREVHQQGEQDHHYQRQRSSLPRKRSSVWLMRQRSTETRMTSKRRPSR 449
R P R +YRE H + + H R + RS + R ++ R T + P R
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSYKKRSHRSD-RYTERENPDR 373
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 30.3 bits (65), Expect = 0.32
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Frame = -3
Query: 539 VVSPKEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKL 387
V +PKE ER+ E + NED K+K IQ KN+ + + ST E
Sbjct: 483 VKAPKETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMP 542
Query: 386 KEKISDSDKQTILDKCND 333
K+ I K +I + +D
Sbjct: 543 KDTIPSRFKTSISTEVHD 560
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 30.3 bits (65), Expect = 0.32
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -3
Query: 386 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKEL-EGIYNPIITKMXPG--C 219
+EKI +++TI D K + + ++ EEY KQKEL E + P ++ P
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQEELEFPDEVELQPNELA 486
Query: 218 RRSPRRYAGL 189
R ++Y GL
Sbjct: 487 RERFKKYRGL 496
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.42
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = -3
Query: 527 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 348
KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1607 KEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV---- 1661
Query: 347 DKCNDTIKWLDSNQLADKEEYEHKQKELE 261
K + + A YE K ++L+
Sbjct: 1662 -KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 28.7 bits (61), Expect = 0.98
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = -3
Query: 542 KVVSPKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISD 369
K+ + + ER+ EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 79 KLQKQRAQEERIRQKEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRL 137
Query: 368 SDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 267
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 138 QEQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 0.98
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 503 NEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 324
N+ E + DDKQ + KN+LE+ M+ + E K D ++ LDK D K
Sbjct: 1272 NKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDNEMEDLDKMEDLEK 1330
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -3
Query: 524 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 348
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 347 DKCNDTIKWLDSNQLADKEEYEHKQK 270
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.9 bits (59), Expect = 1.7
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -3
Query: 515 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC- 339
E ++EK ++ K + KNA ++ M DE+ E S K+ K
Sbjct: 100 EEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSK 159
Query: 338 NDTIKWLDSNQLADKEEYEHKQKE 267
+D + LD + E+ + K+K+
Sbjct: 160 DDGSEALDDGDIESSEKDKKKKKK 183
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 556 HYQRQRSSLPRKRSSVWLMRQRSTETRMTSKR 461
HYQR + L R +W+ STET +T KR
Sbjct: 572 HYQRSKRKL-FTRLYIWMKDGDSTETSLTFKR 602
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 509 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 405
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 596 ETLRIPLASMSKVTSI*GTPRGAGGIP 676
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 3.9
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -3
Query: 506 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 327
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 326 KWLDSNQLADKEEYEHKQKELEGIYNPI 243
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -3
Query: 479 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 318
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 3.9
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -3
Query: 479 EDDKQKETIQAKNALE-SYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN-- 309
E K+ ET++ KN+ + + ++ E LK +K ++++ IK + N
Sbjct: 503 EVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNVS 562
Query: 308 QLADK-EEYEHKQKELEGIYNPII 240
+L +EY +K K+ E YN ++
Sbjct: 563 ELNGTIDEYRNKLKDKEETYNEVM 586
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 26.2 bits (55), Expect = 5.2
Identities = 20/95 (21%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = -3
Query: 542 KVVSPKEEIERMVNEAEKYRNEDDKQKE-TIQAKNALESYCFSMKSTMEDEKLKEKISDS 366
+VV P E+ ++ +N Y N K +E T+ ++ +L S +++ + + + I +
Sbjct: 40 QVVVPSEKQKQNLNLPNSYTNSSQKVRESTVNSQASLSSN--DLRTELLIKSGENAILRA 97
Query: 365 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 261
+ + N ++ L+++ ++EY+ K +EL+
Sbjct: 98 NLLKQSEANNAALESLNNSIKQKQDEYQRKLEELK 132
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 524 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 354
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = -3
Query: 539 VVSPKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 360
V + +++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K
Sbjct: 387 VGNQEDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSK 446
Query: 359 QTILD 345
T +D
Sbjct: 447 STSVD 451
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = -3
Query: 542 KVVSPKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME------DEKLKE 381
KV SPK+E N AEK D + + ++ K++ MKS++ D+ L
Sbjct: 111 KVKSPKKEKLVGKNPAEKEDTTDVEDTQKLEQKHSTTPSSLKMKSSISLAAITADDSLHN 170
Query: 380 KISDSD 363
S +D
Sbjct: 171 SFSSND 176
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 6.9
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Frame = -3
Query: 536 VSPKEEIERMVNEAEKYRNEDDKQK-ETI----QAKNALE-SYCFSMKSTME-DEKLKEK 378
V P V E K R+ED+ QK ET+ + K +E S+ S + E +K++
Sbjct: 453 VKPTTPSASKVEEPSKKRDEDNHQKEETVTQPKREKTPVEKSFPKPASSPVTFSEDVKKE 512
Query: 377 ISDSDKQTILDKCNDTIKWLDSNQLADKEE-YEHKQKE 267
S+ K + D+ +S ++ +KE Y K K+
Sbjct: 513 PSEEKKLEVSDEAPKAAPLAESKKVEEKEPFYVSKDKK 550
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 6.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 476 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 300
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 299 DK 294
DK
Sbjct: 238 DK 239
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.8 bits (54), Expect = 6.9
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -3
Query: 542 KVVSPKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 363
K + I V + E+ + D T+Q K +S FS K + E L +KIS+ D
Sbjct: 390 KALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLLKKISEID 444
Query: 362 KQTILDKC 339
QT ++C
Sbjct: 445 SQTSFEQC 452
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = -3
Query: 533 SPKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 408
S + E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 298 SSETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -3
Query: 527 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 348
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 347 DKC 339
D C
Sbjct: 754 DGC 756
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 446 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 321
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.4 bits (53), Expect = 9.1
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -3
Query: 482 NEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 306
NE + Q + ++ K N + + E+ +K + + D L+ + + L N
Sbjct: 590 NELNSQIDELKLKLNEANKKYQELAISFENSNVKTQSVEPDNGLSLEALKNENQTLLKNL 649
Query: 305 LADKEEYEHKQKELEGIYNPI 243
YEH QK + ++N +
Sbjct: 650 EDSTARYEHLQKSFKNVFNQL 670
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,458,627
Number of Sequences: 5004
Number of extensions: 43736
Number of successful extensions: 231
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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