Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_G04
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0026 + 13896436-13896689,13896833-13896842                       30   2.8  
07_03_0173 - 14721369-14721503,14722542-14722629,14723580-147237...    30   2.8  
01_01_0577 + 4290014-4290325                                           29   4.9  
09_04_0682 - 19429007-19429426                                         29   6.5  
07_03_0839 + 21916842-21917852,21917944-21919602                       28   8.6  
05_03_0594 - 15922956-15923483                                         28   8.6  
03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820           28   8.6  

>09_04_0026 + 13896436-13896689,13896833-13896842
          Length = 87

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 197 SPCRRAGGAGNCRPPLTC 250
           S C   GGAGNC P +TC
Sbjct: 67  SCCTNGGGAGNCPPGVTC 84


>07_03_0173 -
           14721369-14721503,14722542-14722629,14723580-14723752,
           14727237-14727902
          Length = 353

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 21/68 (30%), Positives = 27/68 (39%)
 Frame = +2

Query: 50  IINLRKSRQTSQVEV*TLKRNDKGRECEFGGRSRGGGAANPTTHVVTDRSPCRRAGGAGN 229
           I  LR+   T QV V TL       + +  G   GGG       V+   SP RR   + +
Sbjct: 73  IAPLRRLFPTLQVRVETLGVGASSDDADGDGDGGGGGGGGRVAVVLGPASPARRVEASSS 132

Query: 230 CRPPLTCS 253
              PL  S
Sbjct: 133 SGEPLELS 140


>01_01_0577 + 4290014-4290325
          Length = 103

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +2

Query: 113 DKGRECEFG-GRSRGGGAANPTTHVVTDRSPCRRAGGAGN 229
           DK R    G G  RGGG    T+   TD    R  GG G+
Sbjct: 39  DKERASGIGYGGERGGGGGKTTSSATTDLGDGRDRGGGGD 78


>09_04_0682 - 19429007-19429426
          Length = 139

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 131 EFGGRSRGGGAANPTTHVVTDRSPCRRAGG 220
           + G R+ GGG A P T    +R+  RR+GG
Sbjct: 27  QLGERASGGGTAWPMTRRAHERAGGRRSGG 56


>07_03_0839 + 21916842-21917852,21917944-21919602
          Length = 889

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 152 GGGAANPTTHVVTDRSPCRRAGGAGNCRPPLTCSGGYRKRGCI 280
           GGG  +     V ++  C   GG G  RPPL  +  Y+ +G I
Sbjct: 53  GGGGKDDVWVAVDEKDVCGARGGDGAARPPLFRT--YKVKGSI 93


>05_03_0594 - 15922956-15923483
          Length = 175

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 206 RRAGGAGNCRPPLTCSGGYRKRGCI 280
           R  GG G+CRP L   GG R+R  +
Sbjct: 126 RDVGGGGHCRPQLD-GGGVRRRAAV 149


>03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820
          Length = 292

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = +2

Query: 140 GRSRGGGAANPTTHVVTDRSPCRRAGGAGNCRPPL 244
           G S GGG    T      R  CRR   +  C PPL
Sbjct: 17  GLSLGGGGGGTTDAAAAHRGGCRRPSPSSQC-PPL 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,530,021
Number of Sequences: 37544
Number of extensions: 338639
Number of successful extensions: 1060
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)