Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_G02
         (779 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   1.0  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   2.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.7  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   9.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.7  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 484 TERNAHLLACAWRNSSAYSDEANL 555
           T+RN +LLA + RN +  +++ NL
Sbjct: 370 TQRNEYLLALSDRNQNVLNNDLNL 393


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = -2

Query: 589 TCTAQISHI*EEDSLHRNTQMNYAKHKQVNGHFVLWQKALNILKLED 449
           TC  + SHI + D +  +  +  A  K ++    +  + +N  K  D
Sbjct: 80  TCALEKSHIIQNDEIQLDKLVEMANRKNISIDVKMLSECINANKSTD 126


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = +2

Query: 422 YSSIEMLQNVFQL*NVQCLLPQNEMPI 502
           +S  ++  N  +  N+QC++P  ++P+
Sbjct: 588 FSFTKLPMNAGEFANLQCIVPTGDLPL 614


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 634 LLKAWALLQYGFIVFSFHIHGFXCRS 711
           LL    LL +  + FS  IHG+ CR+
Sbjct: 187 LLPTGELLVHS-LEFSDQIHGYRCRT 211


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 594 NAKMFREELNAVGIIESLGSS 656
           N+K+ R+EL+  G +   GSS
Sbjct: 147 NSKIGRDELSQPGSLNGYGSS 167


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 634 LLKAWALLQYGFIVFSFHIHGFXCRS 711
           LL    LL +  + FS  IHG+ CR+
Sbjct: 187 LLPTGELLVHS-LEFSDQIHGYRCRT 211


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,981
Number of Sequences: 438
Number of extensions: 3650
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)