Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F23
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69885-4|CAA93757.1|  208|Caenorhabditis elegans Hypothetical pr...    33   0.19 
AC006696-10|AAF39990.1|  228|Caenorhabditis elegans Hypothetical...    33   0.25 
Z32840-5|CAD88215.1|  509|Caenorhabditis elegans Hypothetical pr...    32   0.44 
Z32840-4|CAA83680.1|  460|Caenorhabditis elegans Hypothetical pr...    32   0.44 
Z32840-3|CAB63430.2|  457|Caenorhabditis elegans Hypothetical pr...    32   0.44 
Z77136-9|CAI91180.1|  474|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z77136-7|CAD54177.1|  472|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z77136-6|CAB00883.1|  488|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z82076-5|CAB04935.2|  307|Caenorhabditis elegans Hypothetical pr...    29   3.1  

>Z69885-4|CAA93757.1|  208|Caenorhabditis elegans Hypothetical
           protein T04C10.4 protein.
          Length = 208

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -3

Query: 709 RRSRKKEQNKNAATRYRQKKKAXXXXXXXXEQTLRQRHTELRGEV 575
           ++ RKK QN+ AATRYR+KK+          + L   + +L+ +V
Sbjct: 140 KKERKKAQNRLAATRYREKKRREKEEAMTCIEGLSVTNGKLKDQV 184


>AC006696-10|AAF39990.1|  228|Caenorhabditis elegans Hypothetical
           protein W08E12.1 protein.
          Length = 228

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 703 SRKKEQNKNAATRYRQKKKAXXXXXXXXEQTLRQRHTELR 584
           SRK++QNK AA RYR K+KA         +    R+  L+
Sbjct: 165 SRKRQQNKVAAARYRDKQKAKWQDLLDQLEAEEDRNQRLK 204


>Z32840-5|CAD88215.1|  509|Caenorhabditis elegans Hypothetical
           protein C07G2.2c protein.
          Length = 509

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -3

Query: 784 PXSXVXHRPTGXXRTVTXKTRSVDXRRSRKKEQNKNAATRYRQKKKAXXXXXXXXEQTLR 605
           P +    R  G  R+ T   +  D RR+   E+NK AA RYR++KK          Q + 
Sbjct: 369 PQNGTPGRGRGRGRSTTADMQP-DERRNTILERNKAAAVRYRKRKKEEHDDMMGRVQAME 427

Query: 604 QRHTEL 587
               +L
Sbjct: 428 AEKNQL 433


>Z32840-4|CAA83680.1|  460|Caenorhabditis elegans Hypothetical
           protein C07G2.2b protein.
          Length = 460

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -3

Query: 784 PXSXVXHRPTGXXRTVTXKTRSVDXRRSRKKEQNKNAATRYRQKKKAXXXXXXXXEQTLR 605
           P +    R  G  R+ T   +  D RR+   E+NK AA RYR++KK          Q + 
Sbjct: 320 PQNGTPGRGRGRGRSTTADMQP-DERRNTILERNKAAAVRYRKRKKEEHDDMMGRVQAME 378

Query: 604 QRHTEL 587
               +L
Sbjct: 379 AEKNQL 384


>Z32840-3|CAB63430.2|  457|Caenorhabditis elegans Hypothetical
           protein C07G2.2a protein.
          Length = 457

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -3

Query: 784 PXSXVXHRPTGXXRTVTXKTRSVDXRRSRKKEQNKNAATRYRQKKKAXXXXXXXXEQTLR 605
           P +    R  G  R+ T   +  D RR+   E+NK AA RYR++KK          Q + 
Sbjct: 320 PQNGTPGRGRGRGRSTTADMQP-DERRNTILERNKAAAVRYRKRKKEEHDDMMGRVQAME 378

Query: 604 QRHTEL 587
               +L
Sbjct: 379 AEKNQL 384


>Z77136-9|CAI91180.1|  474|Caenorhabditis elegans Hypothetical
           protein ZC376.7c protein.
          Length = 474

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 721 SVDXRRSRKKEQNKNAATRYRQKKKAXXXXXXXXEQTLRQRH 596
           SVD    R++  N+ AA RYR+KK+A         Q +  R+
Sbjct: 404 SVDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRN 445


>Z77136-7|CAD54177.1|  472|Caenorhabditis elegans Hypothetical
           protein ZC376.7b protein.
          Length = 472

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 721 SVDXRRSRKKEQNKNAATRYRQKKKAXXXXXXXXEQTLRQRH 596
           SVD    R++  N+ AA RYR+KK+A         Q +  R+
Sbjct: 402 SVDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRN 443


>Z77136-6|CAB00883.1|  488|Caenorhabditis elegans Hypothetical
           protein ZC376.7a protein.
          Length = 488

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 721 SVDXRRSRKKEQNKNAATRYRQKKKAXXXXXXXXEQTLRQRH 596
           SVD    R++  N+ AA RYR+KK+A         Q +  R+
Sbjct: 418 SVDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRN 459


>Z82076-5|CAB04935.2|  307|Caenorhabditis elegans Hypothetical
           protein W07G1.3 protein.
          Length = 307

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 700 RKKEQNKNAATRYRQKKKAXXXXXXXXEQTLRQRHTELRGEV 575
           RK+ QN  AA RYR++++            L +R+ ELR +V
Sbjct: 248 RKRIQNNLAAARYRKRQREARESAESELGDLTRRNDELRDQV 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,121,788
Number of Sequences: 27780
Number of extensions: 282831
Number of successful extensions: 584
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)