Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F23
         (843 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   4.7  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   6.2  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   6.2  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   8.1  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   8.1  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   8.1  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   8.1  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   8.1  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = +3

Query: 24  SHS-IYCKKY*KNNQRF 71
           SH+ IYC+KY KN + +
Sbjct: 157 SHNDIYCEKYEKNGETY 173


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 496 KSINNAASREIKQYAKTHKAIDSVDHRKLRE 404
           KS +   SRE K+  + +  + +V+ + LRE
Sbjct: 2   KSCSRDRSREYKKKDRRYDQLHNVEEKHLRE 32


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 730 KTRSVDXRRSRKKEQNKNAATRYRQKKK 647
           K  S    R +K  +N+N+  +YR+  K
Sbjct: 270 KRYSCSREREQKSYKNENSYRKYRETSK 297


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 730 KTRSVDXRRSRKKEQNKNAATRYRQKKK 647
           K  S    R +K  +N+N+  +YR+  K
Sbjct: 37  KRYSRSREREKKSYKNENSYRKYRETSK 64


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 730 KTRSVDXRRSRKKEQNKNAATRYRQKKK 647
           K  S    R +K  +N+N+  +YR+  K
Sbjct: 37  KRYSRSREREKKSYKNENSYRKYRETSK 64


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 730 KTRSVDXRRSRKKEQNKNAATRYRQKKK 647
           K  S    R +K  +N+N+  +YR+  K
Sbjct: 37  KRYSRSREREKKSYKNENSYRKYRETSK 64


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 730 KTRSVDXRRSRKKEQNKNAATRYRQKKK 647
           K  S    R +K  +N+N+  +YR+  K
Sbjct: 37  KRYSRSREREKKSYKNENSYRKYRETSK 64


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 730 KTRSVDXRRSRKKEQNKNAATRYRQKKK 647
           K  S    R +K  +N+N+  +YR+  K
Sbjct: 270 KRYSRSREREKKSYKNENSYRKYRETSK 297


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,926
Number of Sequences: 438
Number of extensions: 4012
Number of successful extensions: 41
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)