Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F22
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...   287   6e-78
AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical ...   287   6e-78
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...   287   6e-78
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    29   2.9  
U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fus...    29   3.8  
EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell f...    29   3.8  
AF077541-9|AAC64633.1|  909|Caenorhabditis elegans Cysteinyl trn...    29   5.0  
AF077541-8|AAK68426.1|  908|Caenorhabditis elegans Cysteinyl trn...    29   5.0  

>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score =  287 bits (704), Expect = 6e-78
 Identities = 138/171 (80%), Positives = 155/171 (90%)
 Frame = -2

Query: 783 IPTXVISITDGQXFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 604
           IPT VISITDGQ FLETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY
Sbjct: 339 IPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 398

Query: 603 REVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLD 424
           REVAAFAQFGSDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+D
Sbjct: 399 REVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVD 458

Query: 423 PSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 271
           PS IT FEKEF  H+++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 459 PSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 509


>AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical
           protein H28O16.1c protein.
          Length = 503

 Score =  287 bits (704), Expect = 6e-78
 Identities = 138/171 (80%), Positives = 155/171 (90%)
 Frame = -2

Query: 783 IPTXVISITDGQXFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 604
           IPT VISITDGQ FLETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY
Sbjct: 331 IPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 390

Query: 603 REVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLD 424
           REVAAFAQFGSDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+D
Sbjct: 391 REVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVD 450

Query: 423 PSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 271
           PS IT FEKEF  H+++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 451 PSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 501


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score =  287 bits (704), Expect = 6e-78
 Identities = 138/171 (80%), Positives = 155/171 (90%)
 Frame = -2

Query: 783 IPTXVISITDGQXFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 604
           IPT VISITDGQ FLETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY
Sbjct: 366 IPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 425

Query: 603 REVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLD 424
           REVAAFAQFGSDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+D
Sbjct: 426 REVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVD 485

Query: 423 PSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 271
           PS IT FEKEF  H+++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 486 PSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 536


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -2

Query: 783 IPTXVISITDGQXFLETELFYKGIRPAINVGLSVSRVGSAAQTKAM 646
           IP     IT+GQ +++ +L  + I P INV  S+SR+  +A  + M
Sbjct: 345 IPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRLMKSAIGEGM 390


>U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fusion
           failure protein1 protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 584 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 480
           P    +W   HS CS  EC  L S   D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522


>EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell
           fusion failure-1 protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 584 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 480
           P    +W   HS CS  EC  L S   D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522


>AF077541-9|AAC64633.1|  909|Caenorhabditis elegans Cysteinyl trna
           synthetase protein1, isoform a protein.
          Length = 909

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 490 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 609
           G  L L+EE  K  S V + LC  +  R+ + K  +L  L
Sbjct: 649 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 688


>AF077541-8|AAK68426.1|  908|Caenorhabditis elegans Cysteinyl trna
           synthetase protein1, isoform b protein.
          Length = 908

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 490 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 609
           G  L L+EE  K  S V + LC  +  R+ + K  +L  L
Sbjct: 648 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 687


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,821,868
Number of Sequences: 27780
Number of extensions: 335915
Number of successful extensions: 1097
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)