Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F21
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 65 7e-11
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 65 7e-11
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 65 7e-11
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 65 7e-11
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 64 9e-11
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 37 0.020
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 37 0.020
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 30 1.7
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 30 1.7
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 30 1.7
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 30 1.7
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 30 1.7
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 30 1.7
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 30 2.3
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 30 2.3
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 29 5.3
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 29 5.3
U50310-6|AAA92542.1| 212|Caenorhabditis elegans Ground-like (gr... 29 5.3
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 29 5.3
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 29 5.3
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 29 5.3
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 29 5.3
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 64.9 bits (151), Expect = 7e-11
Identities = 39/69 (56%), Positives = 39/69 (56%)
Frame = -2
Query: 808 PXXGXKMXATFXR*LXPPXRSCSXASRXQLPAMFRRXLSCIGTPGEGMDEMEFTEAESNM 629
P G KM ATF S Q AMFRR GEGMDEMEFTEAESNM
Sbjct: 357 PPRGLKMSATFIGNSTAIQELFKRISE-QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 628 NDLVSEYQQ 602
NDLVSEYQQ
Sbjct: 416 NDLVSEYQQ 424
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 64.9 bits (151), Expect = 7e-11
Identities = 39/69 (56%), Positives = 39/69 (56%)
Frame = -2
Query: 808 PXXGXKMXATFXR*LXPPXRSCSXASRXQLPAMFRRXLSCIGTPGEGMDEMEFTEAESNM 629
P G KM ATF S Q AMFRR GEGMDEMEFTEAESNM
Sbjct: 357 PPRGVKMAATFVGNSTAIQELFKRISE-QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 628 NDLVSEYQQ 602
NDLVSEYQQ
Sbjct: 416 NDLVSEYQQ 424
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 64.9 bits (151), Expect = 7e-11
Identities = 39/69 (56%), Positives = 39/69 (56%)
Frame = -2
Query: 808 PXXGXKMXATFXR*LXPPXRSCSXASRXQLPAMFRRXLSCIGTPGEGMDEMEFTEAESNM 629
P G KM ATF S Q AMFRR GEGMDEMEFTEAESNM
Sbjct: 357 PPRGLKMSATFIGNSTAIQELFKRISE-QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 628 NDLVSEYQQ 602
NDLVSEYQQ
Sbjct: 416 NDLVSEYQQ 424
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 64.9 bits (151), Expect = 7e-11
Identities = 39/69 (56%), Positives = 39/69 (56%)
Frame = -2
Query: 808 PXXGXKMXATFXR*LXPPXRSCSXASRXQLPAMFRRXLSCIGTPGEGMDEMEFTEAESNM 629
P G KM ATF S Q AMFRR GEGMDEMEFTEAESNM
Sbjct: 357 PPRGLKMSATFIGNSTAIQELFKRISE-QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 628 NDLVSEYQQ 602
NDLVSEYQQ
Sbjct: 416 NDLVSEYQQ 424
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 64.5 bits (150), Expect = 9e-11
Identities = 38/69 (55%), Positives = 39/69 (56%)
Frame = -2
Query: 808 PXXGXKMXATFXR*LXPPXRSCSXASRXQLPAMFRRXLSCIGTPGEGMDEMEFTEAESNM 629
P G KM ATF S Q AMFRR GEGMDEMEFTEAESNM
Sbjct: 357 PPRGLKMAATFVGNSTAIQELFKRISE-QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 628 NDLVSEYQQ 602
NDL+SEYQQ
Sbjct: 416 NDLISEYQQ 424
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 64.5 bits (150), Expect = 9e-11
Identities = 38/69 (55%), Positives = 39/69 (56%)
Frame = -2
Query: 808 PXXGXKMXATFXR*LXPPXRSCSXASRXQLPAMFRRXLSCIGTPGEGMDEMEFTEAESNM 629
P G KM ATF S Q AMFRR GEGMDEMEFTEAESNM
Sbjct: 357 PPRGLKMAATFVGNSTAIQELFKRISE-QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 628 NDLVSEYQQ 602
NDL+SEYQQ
Sbjct: 416 NDLISEYQQ 424
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -2
Query: 667 MDEMEFTEAESNMNDLVSEYQQ 602
M+E EFT+AE+ +NDL+SE+QQ
Sbjct: 398 MEESEFTDAENKVNDLISEFQQ 419
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -2
Query: 667 MDEMEFTEAESNMNDLVSEYQQ 602
M+E EFT+AE+ +NDL+SE+QQ
Sbjct: 398 MEESEFTDAENKVNDLISEFQQ 419
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EFTEA ++ L +Y++
Sbjct: 408 GEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EFTEA ++ L +Y++
Sbjct: 408 GEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EFTEA ++ L +Y++
Sbjct: 408 GEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EFTEA ++ L +Y++
Sbjct: 408 GEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EFTEA ++ L +Y++
Sbjct: 408 GEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EFTEA ++ L +Y++
Sbjct: 408 GEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EFTEA ++ L +Y++
Sbjct: 45 GEGMEEGEFTEAREDLAALEKDYEE 69
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EF+EA +M L +Y++
Sbjct: 416 GEGMEEGEFSEAREDMAALEKDYEE 440
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EF+EA +M L +Y++
Sbjct: 410 GEGMEEGEFSEAREDMAALEKDYEE 434
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EF+EA +M L +Y++
Sbjct: 388 GEGMEEGEFSEAREDMAALEKDYEE 412
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 173 YLRCNFSSSFCNQCDELLAFSNE 105
YLRC++ +S QC E FSN+
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSND 1148
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EF+EA ++ L +Y++
Sbjct: 405 GEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EF+EA ++ L +Y++
Sbjct: 410 GEGMEEGEFSEAREDLAALEKDYEE 434
>U50310-6|AAA92542.1| 212|Caenorhabditis elegans Ground-like (grd
related) protein 8 protein.
Length = 212
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 603 CWYSETRSFMLLSASVNSISSMPSPGVPMQE 695
C Y R F+L+S + ++I +PSP P+ E
Sbjct: 2 CHYYLLRGFLLISVASSAIIPLPSPPNPLPE 32
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EF+EA ++ L +Y++
Sbjct: 415 GEGMEEGEFSEAREDLAALEKDYEE 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EF+EA ++ L +Y++
Sbjct: 409 GEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EF+EA ++ L +Y++
Sbjct: 410 GEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602
GEGM+E EF+EA ++ L +Y++
Sbjct: 410 GEGMEEGEFSEAREDLAALEKDYEE 434
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,720,689
Number of Sequences: 27780
Number of extensions: 270271
Number of successful extensions: 703
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -