Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F20
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0810 + 11429776-11429985,11430003-11430935                       34   0.15 
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323...    31   1.4  
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383...    29   3.3  
03_02_0811 + 11437654-11438958                                         28   7.6  
03_02_0809 + 11419318-11420493                                         28   7.6  
01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841     28   7.6  

>03_02_0810 + 11429776-11429985,11430003-11430935
          Length = 380

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 507 TQIHTQIFHGKF*ITTARLQLFLSLFGVTXSVPALKFACGLFRN 638
           T ++T  ++ K  +TT  +++    FG   SVP + F CGLF N
Sbjct: 111 TCVYTYYYNDKS-VTTGLIEVDKFTFGAGASVPGVAFGCGLFNN 153


>05_01_0410 -
           3234455-3234466,3234851-3234950,3235037-3235161,
           3235244-3235400,3235644-3235735,3235828-3235855,
           3235949-3236066,3236411-3236466,3236556-3236653,
           3236864-3236948,3237428-3237600
          Length = 347

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 725 FPTIXXSLRQLQEPQRYNGGRAXEDFIKYVSEQATSELK 609
           +PTI    +   EP++Y G R  E   +YV+ +A + +K
Sbjct: 104 YPTIQWFPKGSLEPKKYEGQRTAEALAEYVNSEAATNVK 142



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = -1

Query: 725 FPTIXXSLRQLQEPQRYNGGRAXEDFIKYVSEQ 627
           FPT+    +  +  + Y+GGR  +DF+K+++E+
Sbjct: 223 FPTLKFFPKGNKAGEDYDGGRELDDFVKFINEK 255


>01_03_0161 +
           13337265-13337297,13337880-13338017,13338211-13338308,
           13338395-13338450,13338664-13338781,13338889-13338916,
           13339021-13339112,13339321-13339477,13339569-13339693,
           13339785-13339884,13339991-13340059
          Length = 337

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -1

Query: 725 FPTIXXSLRQLQEPQRYNGGRAXEDFIKYVSEQ 627
           +PT+    +  +  + Y+GGR  +DF+K+++E+
Sbjct: 194 YPTLKFFPKGNKAGEDYDGGRELDDFVKFINEK 226


>03_02_0811 + 11437654-11438958
          Length = 434

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 507 TQIHTQIFHGKF*ITTARLQLFLSLF-GVTXSVPALKFACGLFRN 638
           T ++T  +  K  +TT  L++    F G   SVP + F CGLF N
Sbjct: 160 TCVYTYSYGDKS-VTTGFLEVDKFTFVGAGASVPGVAFGCGLFNN 203


>03_02_0809 + 11419318-11420493
          Length = 391

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 507 TQIHTQIFHGKF*ITTARLQLFLSLF-GVTXSVPALKFACGLFRN 638
           T ++T  +  K  +TT  L++    F G   SVP + F CGLF N
Sbjct: 113 TCVYTYSYGDKS-VTTGFLEVDKFTFVGAGASVPGVAFGCGLFNN 156


>01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841
          Length = 534

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +3

Query: 321 KVILDLLSVNMMVNECNITIARGTTM----SLYPKNAFHICF--PLDRY 449
           K++  L SV M   +CNIT+  GT      S   ++AF      P DRY
Sbjct: 485 KLVKPLSSVKMASGDCNITVVEGTVHDEEDSCCLRDAFDFSIDDPFDRY 533


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,115,712
Number of Sequences: 37544
Number of extensions: 350389
Number of successful extensions: 727
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)