Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F19
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0600 - 4450664-4450758,4450909-4450960,4451348-4451371,445...    31   0.76 

>01_01_0600 -
           4450664-4450758,4450909-4450960,4451348-4451371,
           4451450-4451483,4454141-4454209,4454816-4454943,
           4455088-4455196,4455558-4455677,4455888-4456084
          Length = 275

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 15/45 (33%), Positives = 30/45 (66%)
 Frame = +1

Query: 283 TKNEALTLFYLEFNAKLRSVNKIIKNLFDRLFVIN*TKMIVRTKI 417
           +KN+ L   +L +N+ +R+V + +KNL DR + +  + ++VR K+
Sbjct: 179 SKNQLLHFTWLVYNSSVRTVRQPLKNLKDRCY-LELSAVVVRFKL 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,891,730
Number of Sequences: 37544
Number of extensions: 198960
Number of successful extensions: 339
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)