Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F19
         (764 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    28   0.083
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    28   0.11 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.77 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   5.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   7.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   7.2  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   7.2  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 0.083
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 107 TNYYLFTLTIREVMCTILLIVLEISRCLENY 199
           TNYYLF L + +++  IL +  E+S   + Y
Sbjct: 68  TNYYLFNLAVSDLLFLILGLPFELSVFWQQY 98


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 107 TNYYLFTLTIREVMCTILLIVLEISRCLENY 199
           TNYYLF+L I +++  +L +  E+S   + Y
Sbjct: 75  TNYYLFSLAISDLILLVLGLPNELSLFWQQY 105


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +2

Query: 80  VLIYFNKNL---TNYYLFTLTIREVMCTI 157
           V+I  NK++   TNYYLF+L + +++  I
Sbjct: 76  VVIARNKSMHTATNYYLFSLAVSDLLLLI 104


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 130 HNSRSNVYNFINSTRNISLFGKLLIKNCVK 219
           HN+ +  YN+ N+  N + +      NC K
Sbjct: 324 HNNNNYKYNYNNNNYNNNNYNNNYNNNCKK 353


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 5/23 (21%), Positives = 17/23 (73%)
 Frame = +2

Query: 98  KNLTNYYLFTLTIREVMCTILLI 166
           + +TNY++ +L + +++  +L++
Sbjct: 218 QTVTNYFIVSLAVADLLVAVLVM 240


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 127 THNSRSNVYNF 159
           T NSR+N YNF
Sbjct: 130 TGNSRANTYNF 140


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 355 KNLFDRLFVIN*TKMIVRTKIQKH 426
           KNL +++  +N +K I  ++  KH
Sbjct: 144 KNLINQMLTVNPSKRITASEALKH 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,460
Number of Sequences: 438
Number of extensions: 2898
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)