Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F17
(844 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 229 3e-61
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 116 6e-27
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 96 6e-21
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 95 1e-20
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 93 4e-20
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 66 6e-12
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 66 8e-12
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 64 3e-11
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 44 2e-05
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 30 0.47
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 28 1.9
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 28 1.9
SPBC14C8.05c |meu17||glucan-alpha-1,4-glucosidase|Schizosaccharo... 27 2.5
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 26 7.7
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 26 7.7
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 26 7.7
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 26 7.7
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 26 7.7
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 26 7.7
SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccha... 26 7.7
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 26 7.7
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 26 7.7
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 26 7.7
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 26 7.7
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 26 7.7
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 229 bits (561), Expect = 3e-61
Identities = 105/119 (88%), Positives = 111/119 (93%)
Frame = -3
Query: 653 APEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 474
APEALFQPS LG+E GIHE TYNSIMKCDVDIRKDLY N V+SGGTTMYPGIADRMQKE
Sbjct: 257 APEALFQPSALGLENAGIHEATYNSIMKCDVDIRKDLYGNVVMSGGTTMYPGIADRMQKE 316
Query: 473 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 297
I ALAPS+MK+KI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IV+RKCF
Sbjct: 317 IQALAPSSMKVKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVYRKCF 375
Score = 60.9 bits (141), Expect = 2e-10
Identities = 34/72 (47%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 831 GXLVXTPREREXVXTXRRSWVX-RFXFEQEMAPXASXXSLEKXYEFPDGQVITIGNERFR 655
G T ERE V + FEQE+ A SLEK YE PDGQVITIGNERFR
Sbjct: 197 GYTFSTTAEREIVRDIKEKLCYVALDFEQELQTAAQSSSLEKSYELPDGQVITIGNERFR 256
Query: 654 CPRGSLPTLVLG 619
P LG
Sbjct: 257 APEALFQPSALG 268
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 116 bits (278), Expect = 6e-27
Identities = 52/119 (43%), Positives = 81/119 (68%)
Frame = -3
Query: 653 APEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 474
APE LF P +G EA G+H + SI+ D+D+R LY+N VLSGG+T+ G +R E
Sbjct: 262 APEVLFNPEMMGSEASGLHIQLFKSILLSDIDLRSTLYSNIVLSGGSTLLRGFGERFISE 321
Query: 473 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 297
+ A++ ++KI A PER ++ W+GGSILASLSTF+++ I+ +EY ++ +++ R+ F
Sbjct: 322 LRAISGKKNQVKIYASPERMHNAWLGGSILASLSTFRRLLITSEEY-KNDQNVIFRRRF 379
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 705 YEFPDGQVITIGNERFRCP 649
Y+ PD Q IT+G E F P
Sbjct: 245 YQLPDNQTITLGTECFSAP 263
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 95.9 bits (228), Expect = 6e-21
Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 11/119 (9%)
Frame = -3
Query: 647 EALFQPSFLGMEAC---------GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 495
E LF PSF + G+HE Y SI+ CD ++R L N V++GGT++ PG+
Sbjct: 300 EILFNPSFSASRSAETTPPQGSVGLHELVYQSILACDSELRSPLLNNIVVTGGTSLIPGL 359
Query: 494 ADRMQKEITALAP-STMKIKII-APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 324
++R+Q E+ LA S + + +VW GGSILASL FQ +W+SKQEYDE G
Sbjct: 360 SERLQAEVQRLATGSRINVHTAETASATSNAVWFGGSILASLDNFQHLWVSKQEYDEVG 418
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 711 KXYEFPDGQVITIGNERFR 655
K +EFPDG G ERFR
Sbjct: 279 KPFEFPDGVTHKFGQERFR 297
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 95.1 bits (226), Expect = 1e-20
Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Frame = -3
Query: 605 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 426
GI + N I +CDVDIR L N ++ GGT++ G + R+Q E++ L P + ++KI A
Sbjct: 326 GIPQLFQNCISECDVDIRASLLNNVIVCGGTSLMQGFSLRLQNELSKLYPGS-RLKIHAS 384
Query: 425 P---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP---SIVHRKC 300
ER Y+ W+GGSIL+SL TF Q+WIS+QEY+E G +++ ++C
Sbjct: 385 GHVVERSYASWLGGSILSSLGTFHQLWISRQEYEEHGSDRLALIEKRC 432
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 738 PXASXXSL-EKXYEFPDGQVITIGNERFRCP 649
P +S ++ E +EFPDG + G ER++ P
Sbjct: 252 PFSSETTIAESEFEFPDGSRMMFGAERYQIP 282
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 93.1 bits (221), Expect = 4e-20
Identities = 51/121 (42%), Positives = 75/121 (61%), Gaps = 12/121 (9%)
Frame = -3
Query: 650 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 471
PE LFQP +G E G+ E +++I DVDIRK LY VLSGG++MY G+ R++KEI
Sbjct: 258 PECLFQPHLVGSEQPGLSEFIFDTIQAADVDIRKYLYRAIVLSGGSSMYAGLPSRLEKEI 317
Query: 470 TAL--------APSTM---KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDES 327
L P+ + K+KI P R+++V+IGG++LA ++ MW+SK E++E
Sbjct: 318 KQLWFERVLHGDPARLPNFKVKIEDAPRRRHAVFIGGAVLADIMAQNDHMWVSKAEWEEY 377
Query: 326 G 324
G
Sbjct: 378 G 378
Score = 34.3 bits (75), Expect = 0.022
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 717 LEKXYEFPDGQVITIGNERFRCP 649
L + Y PDG+VI +G+ER+ CP
Sbjct: 236 LMRNYTLPDGRVIKVGSERYECP 258
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 66.1 bits (154), Expect = 6e-12
Identities = 29/113 (25%), Positives = 59/113 (52%)
Frame = -3
Query: 650 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 471
PE +F PS +G++ GI E + + + ++ ++ L +N +++GG PG+ R+++E+
Sbjct: 599 PEVIFSPSIVGIDQAGILEIMRSILQRHSLEEQQKLVSNVLITGGLGSLPGMETRIKREL 658
Query: 470 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 312
T++ P I + W G S + F+ ++++EY E GP +
Sbjct: 659 TSIMPVGSSINVFRASNPLLDAWKGASEWSVTEKFKAAKVTREEYLEKGPEYI 711
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 65.7 bits (153), Expect = 8e-12
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Frame = -3
Query: 656 VAPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 480
+APE F P + + E N + +D+RK LY N VLSGG+T++ +R+Q
Sbjct: 288 LAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQ 347
Query: 479 KEITALAPST--------------MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 342
+++ + + + +I+ ++ +VW GGS+LA F +K
Sbjct: 348 RDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKA 407
Query: 341 EYDESGPSIVHR 306
+Y+E G SI R
Sbjct: 408 DYEEYGASIARR 419
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 63.7 bits (148), Expect = 3e-11
Identities = 36/116 (31%), Positives = 56/116 (48%)
Frame = -3
Query: 650 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 471
PE LF PS + + GI E S+ +I+ L N V GG +PG R+ E+
Sbjct: 284 PELLFSPSDIEIREAGIPEAVMQSVTHFPENIQAMLLENVVTIGGNCKFPGFHKRLSSEL 343
Query: 470 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 303
+LAP+ ++K+ P + W S + L + I++ EY E G +I+ RK
Sbjct: 344 RSLAPANWEVKVFEPSDPICFPWKKASHM-PLEHWNANKITRSEYSEHGANIMTRK 398
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = -3
Query: 551 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILA 381
K+LY++ ++ GG +PG A +++ I + + I +I PP + ++ W G I
Sbjct: 527 KNLYSSILIVGGAGQFPGFAHLLEERIHSKRANIPTISVIPPPRSMDAQFVAWKGACIYN 586
Query: 380 SLSTFQQMWISKQEYDESGPSIVHRK 303
+ ++WI ++ G ++ K
Sbjct: 587 RIRIVSELWIKNSDWKMLGSRVLQYK 612
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 29.9 bits (64), Expect = 0.47
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 749 RRWPPX--HPXXPXRSXTNFPTVRSSPSETKDSVAPEALFQPSFL 621
+ WP HP P R P++ + P +T S +P + PSF+
Sbjct: 112 KHWPSLKPHPLPPKRVSLGIPSISNPPVDTVISDSPTSPHPPSFV 156
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 719 PXRSXTNFPTVRSSPSETKDSVAPEALFQ--PSFLGMEACGIHETTYNSIMKC 567
P R N P +PS D+ + A P F G+ IH T +S+ C
Sbjct: 173 PLRVPINIPPPLCTPSVVSDTFSEFASHAEYPGFSGLTPFSIHSPTASSVRSC 225
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = -3
Query: 404 WIGGSILASLSTFQQM---WISKQEYDESGPSIVHRK 303
++GGSI+A S + + +++ +EY + GP+ +H K
Sbjct: 486 FLGGSIVAKTSFNESVSSHYVTLEEYAQHGPTAIHTK 522
>SPBC14C8.05c
|meu17||glucan-alpha-1,4-glucosidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 450
Score = 27.5 bits (58), Expect = 2.5
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 526 NTVLAYKSLRMSTSHFMMELYVVSWMPQASIPKNEGWKRASGATESFVSDGDDLTVG 696
+T+LA H + L + P N+GWK+A G V DG ++G
Sbjct: 279 STLLASLYSNEFDMHILPTLLKLQETMTRDYPVNQGWKQAMGRYPEDVYDGVSKSIG 335
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
>SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 479 KEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 369
KEI++ A S + + + P E+ W ILA L+T
Sbjct: 212 KEISSQARSNIALPTLRPQEKNLIDWRDRKILAPLTT 248
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 660 FRCPRGSLPTLVLGYG 613
FRCPRG LV+ YG
Sbjct: 522 FRCPRGVFEYLVMPYG 537
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,032,689
Number of Sequences: 5004
Number of extensions: 59740
Number of successful extensions: 202
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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