Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F12
         (825 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718     32   0.48 
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582...    29   3.4  
10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82...    29   4.5  
07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331     29   5.9  
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144...    29   5.9  
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810...    28   7.8  

>05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718
          Length = 756

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
 Frame = -3

Query: 706 VHVESPTQCPYASQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTP-SKR 530
           V VE P            L   +T P     R+P++SP+  +    T  ++ S TP SK+
Sbjct: 675 VEVEPPKMDSLVKFMQNFLEKEITMPRNRYWRTPVKSPVPAKKLEQTAQNKPSSTPKSKK 734

Query: 529 KCLMKSKCLLTSP 491
               K K L  SP
Sbjct: 735 VWKEKPKTLAPSP 747


>02_01_0782 +
           5827364-5827441,5827733-5827787,5828761-5828849,
           5829167-5829191,5829645-5829683,5830316-5830433,
           5830857-5831023,5831155-5831518,5831589-5831701,
           5832185-5832310,5832436-5833339,5833694-5834036
          Length = 806

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -3

Query: 649 RSPLTSPTRSK*RSPIRSPLKCQYQNLTKS-SRKSLTPSKRKCLMKSKCLLTSPTRSTKE 473
           RSP+ +P RS+ RSP R       ++++ S  R+S   SK +  ++ K +  SP RS  +
Sbjct: 446 RSPVRAPERSESRSPPRE------KSISMSPQRRSARRSKSRSPLREKSVSMSPRRSMSK 499

Query: 472 VQVPLVKEVPYPVKYHVPI 416
                V   P   +   P+
Sbjct: 500 SLPRSVSRSPVARRSRSPV 518


>10_01_0062 -
           818396-818538,819482-819693,819936-820420,820540-820696,
           820787-820924,821127-821703,821978-822018,822679-822809
          Length = 627

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 237 GCVLCINWLL*ALFKATFSLVYRSREFVTETRSCVVVICYYFVSFYVLVI 88
           GC+ C    L   F  T ++ Y S   +     CV+V+ +  V+F +LV+
Sbjct: 356 GCLFCGPLFLTFCFLNTVAIAYNSTAALPFGTICVIVLIWTLVTFPLLVL 405


>07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331
          Length = 599

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = -3

Query: 709 PVHVESPTQCPYASQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKR 530
           P+    P   P  +  P  +    TSP  +   SP+RS L C  + +  + +  L P + 
Sbjct: 439 PLSALEPGSLPERASSPCAIAGLFTSPPPAIIASPLRSTLPC-LRPVVLTRKVKLRPRQH 497

Query: 529 -KCLMKSKCLLTSPTRSTKE 473
            + + +S+ L   P R   E
Sbjct: 498 SQAIRRSEHLAKQPARPMME 517


>05_01_0201 -
           1441063-1443836,1444658-1445758,1446367-1447179,
           1447386-1447440
          Length = 1580

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 703 HVESPTQC--PYASQCPTKLRSPLTSPTRSK*RSPIRSP 593
           H  +P  C  P A+  PT   SP+ +P+ +   SP+ +P
Sbjct: 242 HTPAPAPCVSPVAAPSPTPCASPVAAPSPAPCVSPVAAP 280


>05_06_0276 +
           26878732-26879574,26879920-26880387,26880800-26881021,
           26881153-26881278,26881309-26881573,26881719-26881936
          Length = 713

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -3

Query: 646 SPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRK 527
           SP  SP RS  RSP R  +K Q ++  +S  +S +P++++
Sbjct: 67  SPRRSPVRSIGRSPQRDRVKEQVRSPKQSWSRSPSPARKR 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,018,197
Number of Sequences: 37544
Number of extensions: 262639
Number of successful extensions: 615
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)