Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F12
(825 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 34 0.72
BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for IM... 34 0.72
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 34 0.72
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 34 0.72
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 33 0.95
BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein ... 31 3.8
AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens ... 31 3.8
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 33.9 bits (74), Expect = 0.72
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSP--LTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLT 542
P +SPT+ ++ P K +SP SP + + +SP +SP+K + ++ K+ KS
Sbjct: 635 PEKAKSPTK--EEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKA--KSPV 690
Query: 541 PSKRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
++ K K+K + +S ++ + P+ +E P K P+
Sbjct: 691 KAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPV 732
Score = 32.3 bits (70), Expect = 2.2
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSP--LTSPTRSK*RSP--IRSPLKCQ--YQNLTKSSRKS 548
P +SP + ++ P +++SP SPT+ + +SP +SP K + + KS K+
Sbjct: 615 PAEAKSPVK--EEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKA 672
Query: 547 LTPSK--RKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
+P K K K+K + + +S ++ + P+ +E P K P+
Sbjct: 673 KSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 718
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSPLTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLTPS 536
P +SP + + K SP +++ +SP +SP+K + ++ K+ KS
Sbjct: 649 PEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKA--KSPVKE 706
Query: 535 KRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
+ K K+K + +S ++ + P+ +E P K P+
Sbjct: 707 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPV 746
>BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for
IMAGE:3866238) protein.
Length = 358
Score = 33.9 bits (74), Expect = 0.72
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSP--LTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLT 542
P +SPT+ ++ P K +SP SP + + +SP +SP+K + ++ K+ KS
Sbjct: 30 PEKAKSPTK--EEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKA--KSPV 85
Query: 541 PSKRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
++ K K+K + +S ++ + P+ +E P K P+
Sbjct: 86 KAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPV 127
Score = 32.3 bits (70), Expect = 2.2
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSP--LTSPTRSK*RSP--IRSPLKCQ--YQNLTKSSRKS 548
P +SP + ++ P +++SP SPT+ + +SP +SP K + + KS K+
Sbjct: 10 PAEAKSPVK--EEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKA 67
Query: 547 LTPSK--RKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
+P K K K+K + + +S ++ + P+ +E P K P+
Sbjct: 68 KSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 113
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSPLTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLTPS 536
P +SP + + K SP +++ +SP +SP+K + ++ K+ KS
Sbjct: 44 PEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKA--KSPVKE 101
Query: 535 KRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
+ K K+K + +S ++ + P+ +E P K P+
Sbjct: 102 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPV 141
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSPLTSPTRS--K*RSPIRSPLKCQYQNLTKSSRKSLTPS 536
P +SP + S P K +SP+ +S K +SP++ K + + ++ TP
Sbjct: 78 PEKAKSPVKAEAKS--PEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPE 135
Query: 535 KRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVK 431
K K +K + E ++P +EV PVK
Sbjct: 136 KAKSPVKEEA-------KAPEKEIPKKEEVKSPVK 163
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 33.9 bits (74), Expect = 0.72
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSP--LTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLT 542
P +SPT+ ++ P K +SP SP + + +SP +SP+K + ++ K+ KS
Sbjct: 635 PEKAKSPTK--EEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKA--KSPV 690
Query: 541 PSKRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
++ K K+K + +S ++ + P+ +E P K P+
Sbjct: 691 KAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPV 732
Score = 32.3 bits (70), Expect = 2.2
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSP--LTSPTRSK*RSP--IRSPLKCQ--YQNLTKSSRKS 548
P +SP + ++ P +++SP SPT+ + +SP +SP K + + KS K+
Sbjct: 615 PAEAKSPVK--EEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKA 672
Query: 547 LTPSK--RKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
+P K K K+K + + +S ++ + P+ +E P K P+
Sbjct: 673 KSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 718
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSPLTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLTPS 536
P +SP + + K SP +++ +SP +SP+K + ++ K+ KS
Sbjct: 649 PEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKA--KSPVKE 706
Query: 535 KRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
+ K K+K + +S ++ + P+ +E P K P+
Sbjct: 707 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPV 746
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 33.9 bits (74), Expect = 0.72
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSP--LTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLT 542
P +SPT+ ++ P K +SP SP + + +SP +SP+K + ++ K+ KS
Sbjct: 643 PEKAKSPTK--EEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKA--KSPV 698
Query: 541 PSKRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
++ K K+K + +S ++ + P+ +E P K P+
Sbjct: 699 KAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPV 740
Score = 32.3 bits (70), Expect = 2.2
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSP--LTSPTRSK*RSP--IRSPLKCQ--YQNLTKSSRKS 548
P +SP + ++ P +++SP SPT+ + +SP +SP K + + KS K+
Sbjct: 623 PAEAKSPVK--EEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKA 680
Query: 547 LTPSK--RKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
+P K K K+K + + +S ++ + P+ +E P K P+
Sbjct: 681 KSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 726
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSPLTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLTPS 536
P +SP + + K SP +++ +SP +SP+K + ++ K+ KS
Sbjct: 657 PEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKA--KSPVKE 714
Query: 535 KRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
+ K K+K + +S ++ + P+ +E P K P+
Sbjct: 715 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPV 754
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 33.5 bits (73), Expect = 0.95
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSPLTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLTPS 536
P V+SP + ++ K SP + + +SP +SP+K + ++ K+ KS +
Sbjct: 629 PAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKA--KSPVKA 686
Query: 535 KRKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
+ K K+K + +S ++ + P+ +E P K P+
Sbjct: 687 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPV 726
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSK- 533
P +SP + S K SPT+ + +SP ++ K + KS K+ +P K
Sbjct: 615 PAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKA--KSPEKEEAKSPEKAKSPVKA 672
Query: 532 -RKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
K K+K + + +S ++ + P+ +E P K P+
Sbjct: 673 EAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 712
Score = 32.3 bits (70), Expect = 2.2
Identities = 21/98 (21%), Positives = 44/98 (44%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKR 530
P V+SP + S + +SP + + K +SP++ K + + ++ +P++
Sbjct: 575 PAEVKSPEKAK--SPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEV 632
Query: 529 KCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
K K+K +S ++ + P +E P K P+
Sbjct: 633 KSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPV 670
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = -3
Query: 709 PVHVESPTQCPYASQCPTKLRSPLTSPTRSK*RSP--IRSPLKCQY--QNLTKSSRKSLT 542
P +SP + + K + SP + + +SP ++SP K + + KS K+ +
Sbjct: 595 PAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKS 654
Query: 541 PSKR--KCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 416
P K K K+K + + +S ++ + P+ E P K P+
Sbjct: 655 PEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPV 698
>BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein 9
protein.
Length = 1031
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 574 NLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKE 473
+L S+RKS TP+KR+ ++ + SP RS KE
Sbjct: 806 SLPPSNRKSSTPTKREIMLTPVTVAYSPKRSPKE 839
>AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens
cDNA FLJ12954 fis, clone NT2RP2005491, weakly similar to
PARAMYOSIN. ).
Length = 692
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 574 NLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKE 473
+L S+RKS TP+KR+ ++ + SP RS KE
Sbjct: 602 SLPPSNRKSSTPTKREIMLTPVTVAYSPKRSPKE 635
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,417,338
Number of Sequences: 237096
Number of extensions: 1645109
Number of successful extensions: 11174
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11121
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -