Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F10
(789 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 279 3e-76
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 274 1e-74
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 114 2e-26
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 59 6e-10
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.25
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.3
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.3
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 2.3
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 26 5.4
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.4
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.1
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.4
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 279 bits (684), Expect = 3e-76
Identities = 122/150 (81%), Positives = 136/150 (90%)
Frame = -3
Query: 583 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTERTIQFVDWCPT 404
EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK+ RTIQFVDWCPT
Sbjct: 294 EITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPT 353
Query: 403 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 224
GFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYV
Sbjct: 354 GFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYV 413
Query: 223 GEGMEEGEFSEAREDLAALEKDYEEVGMDS 134
GEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 414 GEGMEEGEFSEAREDLAALERDYEEVGQDS 443
Score = 74.5 bits (175), Expect = 2e-14
Identities = 35/47 (74%), Positives = 37/47 (78%)
Frame = -1
Query: 789 PTYTNLXRXIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPXYPLP 649
PTY NL R I Q+VSSITASLRF G+LNVDL EFQTNLVPYP P
Sbjct: 226 PTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFP 272
Score = 45.2 bits (102), Expect = 1e-05
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 665 PXIHFPLVTYAPVISAEKAYHEQLSV 588
P IHFPLVTY+P++SA KA+HE SV
Sbjct: 267 PRIHFPLVTYSPIVSAAKAFHESNSV 292
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 274 bits (671), Expect = 1e-74
Identities = 120/150 (80%), Positives = 135/150 (90%)
Frame = -3
Query: 583 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTERTIQFVDWCPT 404
EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK +RTIQFVDWCPT
Sbjct: 290 EITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPT 349
Query: 403 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 224
GFK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYV
Sbjct: 350 GFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYV 409
Query: 223 GEGMEEGEFSEAREDLAALEKDYEEVGMDS 134
GEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 410 GEGMEEGEFSEAREDLAALERDYEEVGQDS 439
Score = 74.5 bits (175), Expect = 2e-14
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = -1
Query: 789 PTYTNLXRXIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPXYPLP 649
P+Y NL R I Q+VSSITASLRF+G+LNVDL EFQTNLVPYP P
Sbjct: 222 PSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFP 268
Score = 46.4 bits (105), Expect = 5e-06
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -2
Query: 665 PXIHFPLVTYAPVISAEKAYHEQLSV 588
P IHFPLVTYAP++SA KA+HE SV
Sbjct: 263 PRIHFPLVTYAPIVSAAKAFHESNSV 288
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 114 bits (274), Expect = 2e-26
Identities = 57/153 (37%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Frame = -3
Query: 586 PEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTERTIQFVDWCP 407
PE+T F+ N MV DPRHG+Y+ L+RG V K+V+ I +++T+ + FV+W P
Sbjct: 287 PELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIP 346
Query: 406 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 227
+ PP DL + + + N+T+I E + RL +F M+ ++AF+HWY
Sbjct: 347 DNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWY 398
Query: 226 VGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 137
GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 399 TGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
Score = 43.2 bits (97), Expect = 4e-05
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 789 PTYTNLXRXIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 664
P+Y +L + +++ +T S RF G LN DL + N+VP+P
Sbjct: 220 PSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFP 261
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 59.3 bits (137), Expect = 6e-10
Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Frame = -3
Query: 559 PANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTERTIQFVDWCPTGFKVGIN 383
P NQMV +P + +++ + +G+ P DV+ ++ I+ R F+ W P +V ++
Sbjct: 302 PKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALS 361
Query: 382 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE- 206
+ P + ++ + ML+N T+IA + R ++D + + AF+ Y E + E
Sbjct: 362 KKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFED 416
Query: 205 --GEFSEAREDLAALEKDYE 152
EF +R+ +A L +YE
Sbjct: 417 DLNEFDSSRDVVADLINEYE 436
Score = 33.1 bits (72), Expect = 0.047
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 789 PTYTNLXRXIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 664
PT+ + + ++S+ T +LR+ G +N DL +L+P P
Sbjct: 223 PTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSP 264
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 492 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 358
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 580 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 455
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = -1
Query: 609 LP*TAFRRPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVL 430
+P T+ P + T+ ++ + +TPV ++ CT TS P T + S P
Sbjct: 413 VPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTT 470
Query: 429 SNSSTGVQPVSRSVSTTSHP 370
+N +T S TS P
Sbjct: 471 TNCTTSTSIPYTSTPVTSTP 490
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 288 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 115
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 114 EPKSTK 97
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 452 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGRRKAV 601
S G +LGY ++ A++V+A + V HL+ G D K +
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESKGL 456
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 708 NVDLTEFQTNLVPYPXYPLPTGHVRASHLCREGLP 604
++ L QTNL P + P H SHL + +P
Sbjct: 252 SIPLLGSQTNLQLAPSFAAPQAHPLPSHLSQSNVP 286
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 456 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 370
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 475 WVRRHHGTAYSKPCTCHDGG 534
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 459 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 364
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,108,590
Number of Sequences: 5004
Number of extensions: 67510
Number of successful extensions: 260
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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