Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F09
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 134 7e-32
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 134 9e-32
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 133 2e-31
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 132 2e-31
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 128 5e-30
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 128 5e-30
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 76 3e-14
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 76 3e-14
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 54 9e-08
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 54 9e-08
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 54 9e-08
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 54 9e-08
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 54 9e-08
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 54 9e-08
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 53 3e-07
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 51 9e-07
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 51 9e-07
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 51 9e-07
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 51 9e-07
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 51 9e-07
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cycl... 28 6.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 134 bits (324), Expect = 7e-32
Identities = 66/105 (62%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
++Q K ++ F IP VKTA CDIPP+ + G + KRISEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTEF 482
KAFLHWYTGEGMDEMEF EAESN+NDLVSEY QYQEATA+D+ EF
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEGEF 436
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 134 bits (323), Expect = 9e-32
Identities = 65/104 (62%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
++Q K ++ F IP VKTA CDIPP+ + G + KRISEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
KAFLHWYTGEGMDEMEF EAESN+NDL+SEY QYQEATAEDD +
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDDVD 435
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 133 bits (321), Expect = 2e-31
Identities = 66/104 (63%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
++Q K ++ F IP VKTA CDIPP+ + G + KRISEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
KAFLHWYTGEGMDEMEF EAESN+NDLVSEY QYQEATAE+D E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAEEDGE 435
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 132 bits (320), Expect = 2e-31
Identities = 65/102 (63%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
S+Q K ++ F IP VKTA CDIPP+ + G + KRISEQF+AMFRR
Sbjct: 332 SVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDD 491
KAFLHWYTGEGMDEMEF EAESN+NDL+SEY QYQEATAED+
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDE 433
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 128 bits (309), Expect = 5e-30
Identities = 64/102 (62%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
+IQ K ++ F IP VKTA CDIPP+ + G + KRISEQF+AMFRR
Sbjct: 332 NIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDD 491
KAFLHWYTGEGMDEMEF EAESN+NDLVSEY QYQEA A++D
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADED 433
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 128 bits (309), Expect = 5e-30
Identities = 64/102 (62%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
+IQ K ++ F IP VKTA CDIPP+ + G + KRISEQF+AMFRR
Sbjct: 332 NIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDD 491
KAFLHWYTGEGMDEMEF EAESN+NDLVSEY QYQEA A++D
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADED 433
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 76.2 bits (179), Expect = 3e-14
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = -1
Query: 757 IPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMD 578
+P T CDIP + + + KRIS+QF+ +FRRKAFLHWYT M+
Sbjct: 343 LPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---ME 399
Query: 577 EMEFNEAESNVNDLVSEY*QYQE 509
E EF +AE+ VNDL+SE+ QY++
Sbjct: 400 ESEFTDAENKVNDLISEFQQYEK 422
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 76.2 bits (179), Expect = 3e-14
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = -1
Query: 757 IPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMD 578
+P T CDIP + + + KRIS+QF+ +FRRKAFLHWYT M+
Sbjct: 343 LPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---ME 399
Query: 577 EMEFNEAESNVNDLVSEY*QYQE 509
E EF +AE+ VNDL+SE+ QY++
Sbjct: 400 ESEFTDAENKVNDLISEFQQYEK 422
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + E DD +
Sbjct: 396 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDELPDDID 451
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 370 KVPRAVCMLSNTTAIAEAWA-RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 535 VSEY*QYQEATAEDDTE 485
+Y + + ED+ E
Sbjct: 429 EKDYEEVGVDSMEDNGE 445
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 369 KVPRAVCMLSNTTAIAEAWA-RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 427
Query: 535 VSEY*QYQEATAEDDTE 485
+Y + + ED+ E
Sbjct: 428 EKDYEEVGVDSMEDNGE 444
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 370 KVPRAVCMLSNTTAIAEAWA-RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 535 VSEY*QYQEATAEDDTE 485
+Y + + ED+ E
Sbjct: 429 EKDYEEVGVDSMEDNGE 445
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + E DD +
Sbjct: 368 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDELPDDID 423
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 370 KVPRAVCMLSNTTAIAEAWA-RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 535 VSEY*QYQEATAEDDTE 485
+Y + + ED+ E
Sbjct: 429 EKDYEEVGVDSMEDNGE 445
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + +R+ +F M+ ++AF+HWY GEGM+E EF+EA DL
Sbjct: 365 KVPRAVCMLSNTTAIAEAW-QRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDL 420
Query: 535 VSEY*QYQEATAEDD 491
+ Y+E A+ D
Sbjct: 421 AALEKDYEEVGADSD 435
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + E D E
Sbjct: 395 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDAGEPDEE 450
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L
Sbjct: 373 KVHRAVCMLSNTTAIAEAWA-RLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAAL 431
Query: 535 VSEY*QYQEATAEDDTE 485
+Y + TA+ + E
Sbjct: 432 EKDYAEVSRDTADLEEE 448
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L
Sbjct: 368 KVPRAVCMLSNTTAIAEAW-SRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAAL 426
Query: 535 VSEY 524
+Y
Sbjct: 427 EKDY 430
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L
Sbjct: 368 KVPRAVCMLSNTTAIAEAW-SRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAAL 426
Query: 535 VSEY 524
+Y
Sbjct: 427 EKDY 430
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 51.2 bits (117), Expect = 9e-07
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY 524
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L
Sbjct: 368 KVPRAVCMLSNTTAIAEAW-SRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAAL 426
Query: 535 VSEY 524
+Y
Sbjct: 427 EKDY 430
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L
Sbjct: 368 KVPRAVCMLSNTTAIAEAW-SRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAAL 426
Query: 535 VSEY 524
+Y
Sbjct: 427 EKDY 430
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L
Sbjct: 368 KVPRAVCMLSNTTAIAEAW-SRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAAL 426
Query: 535 VSEY 524
+Y
Sbjct: 427 EKDY 430
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = -1
Query: 715 KV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDL 536
KV R LS T + + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L
Sbjct: 368 KVPRAVCMLSNTTAIAEAW-SRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAAL 426
Query: 535 VSEY 524
+Y
Sbjct: 427 EKDY 430
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY 524
R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y
Sbjct: 25 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDY 67
>AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cyclase
protein 17 protein.
Length = 1146
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -3
Query: 311 EAKSRADTRPSVPGGPTTISKLSMRSRT-TTRHSF 210
++KS A R S GP+T +KL++ SRT TTR F
Sbjct: 488 KSKSEASQR-SFASGPSTSTKLTVESRTETTRFIF 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,065,568
Number of Sequences: 27780
Number of extensions: 288374
Number of successful extensions: 776
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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