Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F08
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82...    29   3.2  
05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718     29   3.2  
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395...    29   3.2  
03_05_0019 + 19862171-19863049                                         29   4.3  
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810...    28   7.4  
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582...    28   7.4  
03_02_0296 + 7191455-7191615,7192031-7192071,7192156-7192741,719...    28   9.8  

>10_01_0062 -
           818396-818538,819482-819693,819936-820420,820540-820696,
           820787-820924,821127-821703,821978-822018,822679-822809
          Length = 627

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 238 GCVLCINWLL*ALFKATFSLVYRSREFVTETRSCVVVICYYFVSFYMLVI 89
           GC+ C    L   F  T ++ Y S   +     CV+V+ +  V+F +LV+
Sbjct: 356 GCLFCGPLFLTFCFLNTVAIAYNSTAALPFGTICVIVLIWTLVTFPLLVL 405


>05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718
          Length = 756

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 654 VKSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTP-SKRKCLMKSKCLLTSP 493
           ++  +T P     R+P++SP+  +    T  ++ S TP SK+    K K L  SP
Sbjct: 693 LEKEITMPRNRYWRTPVKSPVPAKKLEQTAQNKPSSTPKSKKVWKEKPKTLAPSP 747


>03_05_0710 +
           27038709-27038865,27039205-27039346,27039383-27039558,
           27039639-27039703,27040000-27040371,27040429-27040504,
           27040505-27040571,27040672-27040825,27041122-27041289,
           27041392-27041502,27041612-27041722,27041864-27041881,
           27041917-27042018,27042587-27042817,27043390-27043464,
           27043744-27043815,27044597-27044782,27044868-27045026,
           27045251-27045343,27045730-27045801,27046336-27046426,
           27046669-27046847,27047252-27047333,27047526-27047636,
           27047715-27047821,27048194-27048271,27048357-27048452,
           27048627-27048722,27048839-27048856
          Length = 1154

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = -2

Query: 711 PRPC*KPYPVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLT 544
           P P  +P PV    P P  + +P+  P      SP+ +    + Q+    + K LT
Sbjct: 200 PAPAREPPPVPAIAPSPVVIPAPIVDPPPVAVHSPVSTTNLSKSQSFDSPTEKELT 255


>03_05_0019 + 19862171-19863049
          Length = 292

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = -2

Query: 771 EXPXKSNTSRQPYXDXXLXXPRPC*KPYPVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPL 592
           E P K+   +QP        P    +P  V + +P P + + P   P     + P  +  
Sbjct: 178 EPPPKTTQRQQPPGPPPKPQPSAPKRPQVVQMRRPAPAKQQRPTILPPPPVVKRPSPTRG 237

Query: 591 KCQY 580
           KCQY
Sbjct: 238 KCQY 241


>05_06_0276 +
           26878732-26879574,26879920-26880387,26880800-26881021,
           26881153-26881278,26881309-26881573,26881719-26881936
          Length = 713

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -2

Query: 648 SPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRK 529
           SP  SP RS  RSP R  +K Q ++  +S  +S +P++++
Sbjct: 67  SPRRSPVRSIGRSPQRDRVKEQVRSPKQSWSRSPSPARKR 106


>02_01_0782 +
           5827364-5827441,5827733-5827787,5828761-5828849,
           5829167-5829191,5829645-5829683,5830316-5830433,
           5830857-5831023,5831155-5831518,5831589-5831701,
           5832185-5832310,5832436-5833339,5833694-5834036
          Length = 806

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -2

Query: 651 KSPLTSPTRSK*RSPIRSPLKCQYQNLTKS-SRKSLTPSKRKCLMKSKCLLTSPTRSTKE 475
           +SP+ +P RS+ RSP R       ++++ S  R+S   SK +  ++ K +  SP RS  +
Sbjct: 446 RSPVRAPERSESRSPPRE------KSISMSPQRRSARRSKSRSPLREKSVSMSPRRSMSK 499

Query: 474 VQVPLVKEVPYPVKYHVPI 418
                V   P   +   P+
Sbjct: 500 SLPRSVSRSPVARRSRSPV 518


>03_02_0296 +
           7191455-7191615,7192031-7192071,7192156-7192741,
           7193307-7193444,7193572-7193728,7193848-7194332,
           7194867-7195086
          Length = 595

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -1

Query: 238 GCVLCINWLL*ALFKATFSLVYRSREFVTETRSCVVVICYYFVSFYMLVI 89
           GC+ C    L   F  T ++ Y +   +     CV+V+ +  V+F +LV+
Sbjct: 369 GCLFCGPLFLTFCFLNTVAIAYSATAALPFGTICVIVLIWTLVTFPLLVL 418


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,251,231
Number of Sequences: 37544
Number of extensions: 266742
Number of successful extensions: 665
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)