Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F06
         (823 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun...    31   3.8  
BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein ...    31   3.8  
AK023016-1|BAB14359.1|  692|Homo sapiens protein ( Homo sapiens ...    31   3.8  

>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
           protein.
          Length = 1020

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
 Frame = -2

Query: 699 PRPCEXPTQDRTQASALRVKVP--VDSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSK 526
           P   + P ++  ++ A  VK P    SPT+ + +SP ++  K   +   KS  K+ +P K
Sbjct: 615 PAEAKSPVKEEAKSPA-EVKSPEKAKSPTKEEAKSPEKA--KSPEKEEAKSPEKAKSPVK 671

Query: 525 --RKCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 409
              K   K+K  + +  +S ++ + P+ +E   P K   P+
Sbjct: 672 AEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 712


>BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein 9
           protein.
          Length = 1031

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 567 NLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKE 466
           +L  S+RKS TP+KR+ ++    +  SP RS KE
Sbjct: 806 SLPPSNRKSSTPTKREIMLTPVTVAYSPKRSPKE 839


>AK023016-1|BAB14359.1|  692|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12954 fis, clone NT2RP2005491, weakly similar to
           PARAMYOSIN. ).
          Length = 692

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 567 NLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKE 466
           +L  S+RKS TP+KR+ ++    +  SP RS KE
Sbjct: 602 SLPPSNRKSSTPTKREIMLTPVTVAYSPKRSPKE 635


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,993,622
Number of Sequences: 237096
Number of extensions: 1739885
Number of successful extensions: 7385
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7377
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)