Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F05
         (846 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   1.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   1.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   1.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.3  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +3

Query: 483 GYGLSTGMLTGNGTAFSTGYGMCFSTGVRGGHWYXXGVRNW 605
           G  +S    TG GT     YG+      +GG+     + NW
Sbjct: 246 GEAISKHEYTGFGTVIEFQYGLSLGNAFQGGN-QLANLANW 285


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +3

Query: 483 GYGLSTGMLTGNGTAFSTGYGMCFSTGVRGGHWYXXGVRNW 605
           G  +S    TG GT     YG+      +GG+     + NW
Sbjct: 247 GEAISKHEYTGFGTVIEFQYGLSLGNAFQGGN-QLANLANW 286


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +3

Query: 483 GYGLSTGMLTGNGTAFSTGYGMCFSTGVRGGHWYXXGVRNW 605
           G  +S    TG GT     YG+      +GG+     + NW
Sbjct: 247 GEAISKHEYTGFGTVIEFQYGLSLGNAFQGGN-QLANLANW 286


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 141 TFELMYLLWLSYEKLSPIFI 82
           TF ++ +   SYEKLSP+ +
Sbjct: 328 TFLIVMVQKASYEKLSPVVL 347


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 410 WYRYLNWVRYG 442
           W  +L+W RYG
Sbjct: 587 WLSFLSWFRYG 597


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 410 WYRYLNWVRYG 442
           W  +L+W RYG
Sbjct: 587 WLSFLSWFRYG 597


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 755 RSMXTDPTPCIFPN 714
           R++  DPT C+ P+
Sbjct: 151 RALDCDPTQCVLPD 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,800
Number of Sequences: 336
Number of extensions: 2447
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)