Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F05
(846 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 34 0.75
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2... 34 0.75
AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2... 34 0.75
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2... 34 0.75
AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2... 34 0.75
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2... 34 0.75
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein. 34 0.75
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein. 34 0.75
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro... 34 0.75
AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein. 34 0.75
AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein pro... 34 0.75
BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein. 32 2.3
AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein ... 32 2.3
AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein. 32 2.3
AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. 32 2.3
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 32 3.0
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 32 3.0
Z93242-2|CAI42725.1| 530|Homo sapiens retinoic acid induced 2 p... 31 5.3
BC027937-1|AAH27937.1| 530|Homo sapiens RAI2 protein protein. 31 5.3
AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa varia... 31 5.3
AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa varia... 31 5.3
AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens ... 31 5.3
AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein... 31 5.3
AF136587-1|AAD33688.1| 530|Homo sapiens retinoic acid-induced p... 31 5.3
X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein. 31 6.9
Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein. 30 9.2
X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein. 30 9.2
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 30 9.2
CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein. 30 9.2
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 30 9.2
BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.2
BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.2
BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.2
BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.2
BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.2
BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.2
BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.2
BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 9.2
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 30 9.2
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 30 9.2
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 30 9.2
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 30 9.2
AK096477-1|BAC04801.1| 810|Homo sapiens protein ( Homo sapiens ... 30 9.2
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 30 9.2
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 867 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 925
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 926 LDSSEKIPAAIEE 938
>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1377
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 865 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 923
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 924 LDSSEKIPAAIEE 936
>AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 243 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 301
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 302 LDSSEKIPAAIEE 314
>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 863 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 921
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 922 LDSSEKIPAAIEE 934
>AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 243 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 301
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 302 LDSSEKIPAAIEE 314
>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 863 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 921
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 922 LDSSEKIPAAIEE 934
>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 865 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 923
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 924 LDSSEKIPAAIEE 936
>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 865 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 923
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 924 LDSSEKIPAAIEE 936
>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
protein.
Length = 1113
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 601 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 659
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 660 LDSSEKIPAAIEE 672
>AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein.
Length = 699
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 593 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 651
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 652 LDSSEKIPAAIEE 664
>AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein
protein.
Length = 757
Score = 33.9 bits (74), Expect = 0.75
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 652 PLKYTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHI---PYPVEKAVPFPVNIPVDRPYP 482
P T Q R+++ P P PV H+ PV VP PV +PV P P
Sbjct: 245 PHMQTKSCQTDDTWRTEY-VPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAP 303
Query: 481 VHIEKHVPVHIEK 443
+ + +P IE+
Sbjct: 304 LDSSEKIPAAIEE 316
>BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein.
Length = 1235
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/124 (23%), Positives = 44/124 (35%)
Frame = -3
Query: 823 PXKGSRXXXXPYPXXQXGXXPXKGPXGQTLPRAYSQTRPYPRREXPSHTR*KNQCPTPLK 644
P R P P P P Q P Q + PR + P T+ +Q P++
Sbjct: 322 PDLVQRTEAPPQPPPLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSP--TQLLHQNLPPVQ 379
Query: 643 YTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKH 464
AQ S S + + L+ P + A P + P P+P+ + H
Sbjct: 380 AHPSAQSLSQPLSAYNSSSL-SLNSLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNH 438
Query: 463 VPVH 452
P+H
Sbjct: 439 SPLH 442
>AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein 1
protein.
Length = 1259
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/124 (23%), Positives = 44/124 (35%)
Frame = -3
Query: 823 PXKGSRXXXXPYPXXQXGXXPXKGPXGQTLPRAYSQTRPYPRREXPSHTR*KNQCPTPLK 644
P R P P P P Q P Q + PR + P T+ +Q P++
Sbjct: 322 PDLVQRTEAPPQPPPLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSP--TQLLHQNLPPVQ 379
Query: 643 YTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKH 464
AQ S S + + L+ P + A P + P P+P+ + H
Sbjct: 380 AHPSAQSLSQPLSAYNSSSL-SLNSLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNH 438
Query: 463 VPVH 452
P+H
Sbjct: 439 SPLH 442
>AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein.
Length = 1011
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/124 (23%), Positives = 44/124 (35%)
Frame = -3
Query: 823 PXKGSRXXXXPYPXXQXGXXPXKGPXGQTLPRAYSQTRPYPRREXPSHTR*KNQCPTPLK 644
P R P P P P Q P Q + PR + P T+ +Q P++
Sbjct: 74 PDLVQRTEAPPQPPPLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSP--TQLLHQNLPPVQ 131
Query: 643 YTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKH 464
AQ S S + + L+ P + A P + P P+P+ + H
Sbjct: 132 AHPSAQSLSQPLSAYNSSSL-SLNSLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNH 190
Query: 463 VPVH 452
P+H
Sbjct: 191 SPLH 194
>AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.
Length = 1266
Score = 32.3 bits (70), Expect = 2.3
Identities = 29/124 (23%), Positives = 44/124 (35%)
Frame = -3
Query: 823 PXKGSRXXXXPYPXXQXGXXPXKGPXGQTLPRAYSQTRPYPRREXPSHTR*KNQCPTPLK 644
P R P P P P Q P Q + PR + P T+ +Q P++
Sbjct: 353 PDLVQRTEAPPQPPPLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSP--TQLLHQNLPPVQ 410
Query: 643 YTXXAQCPSMSRSQFRTPXXYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKH 464
AQ S S + + L+ P + A P + P P+P+ + H
Sbjct: 411 AHPSAQSLSQPLSAYNSSSL-SLNSLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNH 469
Query: 463 VPVH 452
P+H
Sbjct: 470 SPLH 473
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 31.9 bits (69), Expect = 3.0
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -3
Query: 736 LPRAYSQTRPYPRREXPSHTR*KNQCP-TPLKYTXXAQCPSMSRSQFRTPXXYQCPPLTP 560
LP + P+ R ++ +Q P TP + A CPS +F++P Y PP P
Sbjct: 1818 LPPRSLPSDPFSRVPVSPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRP 1877
Query: 559 VEKHIPYPVEK 527
+ P+ K
Sbjct: 1878 QSRDPFAPLHK 1888
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 31.9 bits (69), Expect = 3.0
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -3
Query: 736 LPRAYSQTRPYPRREXPSHTR*KNQCP-TPLKYTXXAQCPSMSRSQFRTPXXYQCPPLTP 560
LP + P+ R ++ +Q P TP + A CPS +F++P Y PP P
Sbjct: 2123 LPPRSLPSDPFSRVPVSPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRP 2182
Query: 559 VEKHIPYPVEK 527
+ P+ K
Sbjct: 2183 QSRDPFAPLHK 2193
>Z93242-2|CAI42725.1| 530|Homo sapiens retinoic acid induced 2
protein.
Length = 530
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 601 FRTPXXYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYP 482
F +P PP T + +PYPV +P PV IP+ P P
Sbjct: 217 FSSPLSPLVPPATLL---VPYPVIVPLPVPVPIPIPIPMP 253
>BC027937-1|AAH27937.1| 530|Homo sapiens RAI2 protein protein.
Length = 530
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 601 FRTPXXYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYP 482
F +P PP T + +PYPV +P PV IP+ P P
Sbjct: 217 FSSPLSPLVPPATLL---VPYPVIVPLPVPVPIPIPIPVP 253
>AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 507
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 468 FSMWTGYGLSTGMLTGNGTAFSTGYG 545
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 508
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 468 FSMWTGYGLSTGMLTGNGTAFSTGYG 545
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ10655 fis, clone NT2RP2005933, weakly similar to
NUCLEOPORIN NUP57. ).
Length = 484
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 468 FSMWTGYGLSTGMLTGNGTAFSTGYG 545
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein
protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 468 FSMWTGYGLSTGMLTGNGTAFSTGYG 545
F TG+G +TG TG GT TG G
Sbjct: 60 FGFGTGFGTTTGTSTGLGTGLGTGLG 85
>AF136587-1|AAD33688.1| 530|Homo sapiens retinoic acid-induced
protein protein.
Length = 530
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 601 FRTPXXYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYP 482
F +P PP T + +PYPV +P PV IP+ P P
Sbjct: 217 FSSPLSPLVPPATLL---VPYPVIVPLPVPVPIPIPIPVP 253
>X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein.
Length = 341
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 625 CPSMSRSQFRTPXXYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPY 485
C S SR+ R P C P+TP + P P P P ++P RP+
Sbjct: 192 CSSRSRTAARPPCT--CSPVTPRRR--PRPCPARTPRPRSVPACRPW 234
>Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein.
Length = 513
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGY 542
+S CT T WTGY ST LT +S G+
Sbjct: 404 YSSCTVTTVQPWTGYPTSTSPLTSPRGPWSLGW 436
>X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -1
Query: 591 RXXTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 415
R + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 558 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 421
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -1
Query: 591 RXXTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 415
R + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 558 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 421
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 444 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 545
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -1
Query: 591 RXXTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 415
R + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 558 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 421
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -1
Query: 591 RXXTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 415
R + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 558 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 421
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -1
Query: 591 RXXTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 415
R + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 558 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 421
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -1
Query: 591 RXXTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 415
R + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 181 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
>AK096477-1|BAC04801.1| 810|Homo sapiens protein ( Homo sapiens
cDNA FLJ39158 fis, clone OCBBF2002086, highly similar to
Transcriptional regulator, SIN3A. ).
Length = 810
Score = 30.3 bits (65), Expect = 9.2
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = -3
Query: 736 LPRAYSQTRPYPRREXPSHTR*KNQ-CPT-PLKYTXXAQCPSMSRSQFRTPXXYQCPPLT 563
+P +Q +P P + PS ++ P P A+ S+ Q TP Q PPL
Sbjct: 211 IPTHGTQPQPQPPPQHPSQPSAQSAPAPAQPAPQPPPAKVSKPSQLQAHTPASQQTPPLP 270
Query: 562 PVEKHIPYPVEKAVPFPVNI 503
P PV+ P +++
Sbjct: 271 PYASPRSPPVQPHTPVTISL 290
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -1
Query: 591 RXXTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 415
R + +R SRS SR++ R RS+ S + H++S SRS RS R++ + R
Sbjct: 106 RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 164
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 558 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 421
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 369 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 414
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,634,100
Number of Sequences: 237096
Number of extensions: 1620441
Number of successful extensions: 8214
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 7260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8079
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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