Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F04
         (789 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   0.001
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    42   0.018
UniRef50_Q53UB0 Cluster: Vacuolar protein sorting 26; n=3; Entam...    36   1.2  
UniRef50_A5DE84 Cluster: Putative uncharacterized protein; n=1; ...    36   1.2  
UniRef50_Q4S6V2 Cluster: Chromosome 14 SCAF14723, whole genome s...    33   6.2  
UniRef50_Q4RA66 Cluster: Chromosome undetermined SCAF24382, whol...    33   8.2  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +1

Query: 10  FFLLRWMDDLTTHLVLNGYWSP 75
           F LLRW+D+LT HLVL+GYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 41.9 bits (94), Expect = 0.018
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +1

Query: 199 AGWWYLPARTHKRSYHQ 249
           A WWYLPARTHKRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_Q53UB0 Cluster: Vacuolar protein sorting 26; n=3;
           Entamoeba histolytica|Rep: Vacuolar protein sorting 26 -
           Entamoeba histolytica
          Length = 413

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 22/94 (23%), Positives = 44/94 (46%)
 Frame = -2

Query: 767 YRXQRKQTRPVKKSSKSETNXSDTCLRGPRNEPHRTGN*SLPIMKWK*T*PEEKLENLDE 588
           ++  RKQ +P+K S  +  + +  CL G +  P++  + + P+ + +    EE  E + E
Sbjct: 288 FKLWRKQPQPIKTSPDAPISVNTDCLAGSQETPYKGSDVNKPLPEVQPQQSEEPKEEIKE 347

Query: 587 VLKADPSCPSIKIEPIGDVSLPMASSQEDTATEE 486
            +   P   SI+ EP  ++        ++   EE
Sbjct: 348 PVIEQPQ-QSIQEEPKEEIKEEKKEEPKEEVKEE 380


>UniRef50_A5DE84 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 708

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
 Frame = +3

Query: 36  PYNPPGVKWLLEPVDIYNVNAPPTLRYKF*GLKYSYNGCLTLQAQTH-YCFTAEIGRVVV 212
           P N P VK  L+ +    + +  +   K   ++ SY+GCL LQ   H    ++E G+ VV
Sbjct: 99  PKNSPMVKSFLQHIVREQIPSEMSELIKDFSIR-SYDGCLILQVYDHRNMISSETGKPVV 157

Query: 213 PTRAD-SQEVLPPVK 254
           PT+ D S++ L P++
Sbjct: 158 PTKEDPSEKRLSPLQ 172


>UniRef50_Q4S6V2 Cluster: Chromosome 14 SCAF14723, whole genome
            shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 14
            SCAF14723, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 1484

 Score = 33.5 bits (73), Expect = 6.2
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = -2

Query: 650  SLPIMKWK*T*PEEKLENLDEVLKADPSCPSIKIEPIGDVSLPMASSQEDTATEEKNDSG 471
            SLP  +W  T P  K E+    +K +PS  S  +      SLP+   Q  +  +EKN  G
Sbjct: 1261 SLPSQRWSMTAPSNKEEHAYSSIKRNPSFHSPSLP--SSKSLPVGDCQSASQQQEKNQPG 1318


>UniRef50_Q4RA66 Cluster: Chromosome undetermined SCAF24382, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF24382,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 139

 Score = 33.1 bits (72), Expect = 8.2
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -1

Query: 687 RPKKRASSHR-KLKPADNEMEVDMTGGET*KLRRGPQGGPELSQHQDRAHRRRLTTHGQQ 511
           RP +     R +L+P    + V   GG     R   QGG   +  Q R H RRL   G++
Sbjct: 30  RPLEHVQQPRAQLQPQSEPLHVGPEGG-----RASHQGGGAAAGRQQRRHVRRLRLRGRR 84

Query: 510 SRRH 499
           SR H
Sbjct: 85  SRLH 88


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,287,133
Number of Sequences: 1657284
Number of extensions: 15039764
Number of successful extensions: 31976
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31969
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67085240885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)