Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F04
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-378|AAF47586.1|  494|Drosophila melanogaster CG13924-PA...    29   5.5  
AL009195-7|CAA15704.1|  744|Drosophila melanogaster EG:30B8.6 pr...    29   7.2  
AE014134-552|AAF51148.1| 2438|Drosophila melanogaster CG3523-PA ...    29   7.2  

>AE014296-378|AAF47586.1|  494|Drosophila melanogaster CG13924-PA
           protein.
          Length = 494

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -1

Query: 594 RRGPQGGPELSQHQD-RAHRRRLTTHGQQSRRHCYRGEERLWNK 466
           R+ PQ  P L Q Q+ R  RRR      +   H YR     WNK
Sbjct: 451 RQHPQAHPHLHQEQEQRGGRRRRRRDSGEVEVHAYRHLLGSWNK 494


>AL009195-7|CAA15704.1|  744|Drosophila melanogaster EG:30B8.6
           protein.
          Length = 744

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 561 QHQDRAHRRRLTTHGQQSRRHCYRGEERLWNKVFLKIH 448
           QHQ   HR  LTT  +  R     G + +W +  ++ H
Sbjct: 143 QHQHHQHRHSLTTRHRVLRTRSSGGAQNVWEEQMMEQH 180


>AE014134-552|AAF51148.1| 2438|Drosophila melanogaster CG3523-PA
            protein.
          Length = 2438

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = -2

Query: 590  EVLKADPSCPSIKIEPI--GDVSLPMASSQEDTATEEKNDSGIR 465
            +VL A+     I+ EP+  GDV++  +++ E+T T    DSG+R
Sbjct: 1203 DVLVANRLLQIIEGEPVLTGDVAVVTSNNNEETITAALGDSGVR 1246


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,881,956
Number of Sequences: 53049
Number of extensions: 709232
Number of successful extensions: 1810
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1810
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)