Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F02
         (811 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   6.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   6.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   6.6  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 515 RERLVKGLSCPRSPAPA 565
           R+RLVK   C RS AP+
Sbjct: 137 RDRLVKEGICDRSTAPS 153


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 523 TLSSLY*ITPFPSLAFREIHNTFAFRIYIVTSI 425
           T+  L+ +        REI+  FAF++ + TS+
Sbjct: 132 TIKKLFNLHKILVKVVREINGIFAFQVLMCTSM 164


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 106 FISYNFFFSRSIKVFDY 56
           F+SYN +  +++  F+Y
Sbjct: 192 FVSYNIYVCQTVSNFEY 208


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 106 FISYNFFFSRSIKVFDY 56
           F+SYN +  +++  F+Y
Sbjct: 118 FVSYNIYVCQTVSNFEY 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,383
Number of Sequences: 336
Number of extensions: 2946
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)