Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F02
(811 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 70 2e-12
03_01_0034 + 318432-318825,318902-319851 70 2e-12
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 70 2e-12
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 70 2e-12
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 69 4e-12
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 69 4e-12
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 69 4e-12
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 66 2e-11
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 40 0.003
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 40 0.003
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 40 0.003
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 40 0.003
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516... 29 4.4
02_04_0470 - 23183925-23184743,23184929-23185153 29 4.4
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 574 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 604
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQE+F+R S QF FRR
Sbjct: 538 PRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRR 571
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQE+F+R S QF FRR
Sbjct: 358 PTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 415 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 445
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQE+F+R S QF FRR
Sbjct: 379 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRR 412
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQE+F+R S QF FRR
Sbjct: 358 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 68.9 bits (161), Expect = 4e-12
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNMNDLV+EYQQ
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQE+F+R S QF FRR
Sbjct: 358 PIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 68.9 bits (161), Expect = 4e-12
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNMNDLV+EYQQ
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQE+F+R S QF FRR
Sbjct: 358 PRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRR 391
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 68.9 bits (161), Expect = 4e-12
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNMNDLV+EYQQ
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQE+F+R S QF FRR
Sbjct: 358 PNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYT GMDEMEFTEAESNMNDLV+EYQQ
Sbjct: 410 FLHWYTSEGMDEMEFTEAESNMNDLVAEYQQ 440
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQE+F+R S QF FRR
Sbjct: 374 PVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRR 407
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 485 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>08_02_1050 +
23949828-23949981,23950083-23950534,23951599-23951631,
23952069-23952179,23953175-23953348
Length = 307
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 551 SPAPAPRQTLRPRRRWPP 604
SP+P+P + P RRWPP
Sbjct: 27 SPSPSPLLSRAPSRRWPP 44
>02_04_0470 - 23183925-23184743,23184929-23185153
Length = 347
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 545 PRSPAPAPRQTLRPRRRWPPGYCWYS 622
PR P P P+ RP RR PP YS
Sbjct: 261 PRPPPPPPKARRRPCRRRPPSPMAYS 286
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,010,884
Number of Sequences: 37544
Number of extensions: 293594
Number of successful extensions: 820
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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