Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F02
(811 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 70 2e-12
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 70 2e-12
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 70 2e-12
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 66 2e-11
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 66 2e-11
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 37 1e-05
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 47 2e-05
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 40 0.003
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 40 0.003
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 40 0.003
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 40 0.003
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 40 0.003
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 40 0.003
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 40 0.003
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 40 0.003
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 40 0.003
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQELFKR S QF FRR
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 339 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 369
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQELFKR S QF FRR
Sbjct: 303 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 336
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQELFKR S QF FRR
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNM+DL++EYQQ
Sbjct: 159 FLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 189
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQELFKR QF FRR
Sbjct: 123 PKGLKMAATFVGNNTAIQELFKRVGEQFTAMFRR 156
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYTG GMDEMEFTEAESNM+DL++EYQQ
Sbjct: 221 FLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 251
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 809 PXGFXXXXPLXGXXPXIQELFKRXSXQFXXXFRR 708
P G G IQELFKR QF FRR
Sbjct: 185 PKGLKMAATFVGNNTAIQELFKRVGEQFTAMFRR 218
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 37.1 bits (82), Expect(2) = 1e-05
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESN 640
FLHWYT GMD +EFTE + N
Sbjct: 213 FLHWYTTEGMDPLEFTEIKRN 233
Score = 29.9 bits (64), Expect(2) = 1e-05
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -2
Query: 660 FTEAESNMNDLVSEYQQ 610
+ A+SN+NDL+SEYQQ
Sbjct: 256 YFSADSNLNDLISEYQQ 272
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
FLHWYT GMD +F EA++++ DL+S YQQ
Sbjct: 299 FLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 18 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 202 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 388 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 102 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 132
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 556 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 341 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 775 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 1184 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 389 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 820 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 369 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 837 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 867
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 989 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 329 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 202 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 317 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 702 FLHWYTGXGMDEMEFTEAESNMNDLVSEYQQ 610
F+HWY G GM+E EF+EA ++ L +Y++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,637,228
Number of Sequences: 59808
Number of extensions: 344468
Number of successful extensions: 830
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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