Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F01
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    27   0.16 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.22 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.2  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 152 TFELMYLLWLSYEKLSPIFISNSK*VLVAREIKVFFSNNKQILFPKKKKK 3
           TF ++ +   SYEKLSP+ +     + VA +  +F  N   I+   +KK+
Sbjct: 328 TFLIVMVQKASYEKLSPVVLF----IQVAADTVLFILNISTIIITARKKQ 373


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 584  PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 477
            PLT  R  + T    PCR+   SP++     T RST
Sbjct: 915  PLTSPRQPAETHAGSPCRNSA-SPASSDRSGTPRST 949


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
 Frame = +1

Query: 586 GHWYLD-GVRNWLLDMDG 636
           GHWYLD G   W   M G
Sbjct: 461 GHWYLDCGFGPWKPSMHG 478


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 424 WYRYLNWVRYG 456
           W  +L+W RYG
Sbjct: 587 WLSFLSWFRYG 597


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 424 WYRYLNWVRYG 456
           W  +L+W RYG
Sbjct: 587 WLSFLSWFRYG 597


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 3   FFFFFWKQNLFIIRKKNFY 59
           FF+FF   N+     K FY
Sbjct: 246 FFYFFTTGNIIATYDKQFY 264


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 3   FFFFFWKQNLFIIRKKNFY 59
           FF+FF   N+     K FY
Sbjct: 242 FFYFFTTGNIIATYDKQFY 260


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 74  LVAREIKVFFSNNKQILFPKKKK 6
           L  R+IK++F  N+++ F K++K
Sbjct: 124 LTERQIKIWF-QNRRMKFKKEEK 145


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 74  LVAREIKVFFSNNKQILFPKKKK 6
           L  R+IK++F  N+++ F K++K
Sbjct: 144 LTERQIKIWF-QNRRMKFKKEEK 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,217
Number of Sequences: 336
Number of extensions: 2436
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)