Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_E24
         (867 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   7.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 117 PHPRLQRSPCRLLRNPSRGQPGP 185
           PHP L   P  L  +P+   PGP
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPGP 254


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 117 PHPRLQRSPCRLLRNPSRGQPGP 185
           PHP L   P  L  +P+   PGP
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPGP 146


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 495 GTAYSKPCTCHDGGRISPSGWAGS 566
           G A++ P   HD G  SP G  G+
Sbjct: 50  GNAHTGPTGTHDAGFPSPRGALGA 73


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 452  PSKPSVLSNSSTGVQPVSRSVSTTSHP 372
            P+KPS    S+T       + STT+ P
Sbjct: 1169 PTKPSYRPPSTTNHWQTKTTTSTTTRP 1195


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 515 WLAVCCTVVTSYPRM 471
           W  VC  VV  YPR+
Sbjct: 166 WREVCTFVVQVYPRL 180


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 478 GYDVTTVQHTASHVLAMTGVAFHHLVGR 561
           G D+  VQH  ++ L  +   + H +GR
Sbjct: 472 GLDIKDVQHVINYDLPKSIDEYVHRIGR 499


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,587
Number of Sequences: 336
Number of extensions: 3971
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)