Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_E23
         (988 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0906 - 7124686-7124730,7124854-7124925,7125257-7125383,712...    50   4e-06
05_03_0041 - 7662094-7662138,7662269-7662340,7663144-7663179,766...    40   0.002
08_02_1012 + 23550314-23551504                                         33   0.46 
12_02_1174 - 26696869-26698191                                         29   5.7  
01_06_0004 + 25507739-25508206,25509346-25509477,25509910-255100...    29   5.7  
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647     28   10.0 

>01_01_0906 -
           7124686-7124730,7124854-7124925,7125257-7125383,
           7125424-7125572,7126126-7126465,7126759-7127090,
           7127327-7127860
          Length = 532

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 20/52 (38%), Positives = 34/52 (65%)
 Frame = -3

Query: 230 DGKFQSGSELDFYIDXDMIHXADTKVAHRYGXFFIRKLXKFEELNRXLHHIK 75
           +GK  S ++ DFYI  D+IH  ++K   R+G +F+R++ KFEE+   L  ++
Sbjct: 479 NGKIVSSADFDFYIKEDVIHVMESKPIKRHGDYFLRQILKFEEMIGELEKVQ 530


>05_03_0041 -
           7662094-7662138,7662269-7662340,7663144-7663179,
           7663356-7663449,7663533-7663681,7664525-7664864,
           7666417-7666748,7667348-7667821
          Length = 513

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 12/64 (18%)
 Frame = -3

Query: 230 DGKFQSGSELDFYIDX------------DMIHXADTKVAHRYGXFFIRKLXKFEELNRXL 87
           DGK  S ++ DFYID             D+IH  ++K+   +G +F+R++ KFEE+   L
Sbjct: 448 DGKVISSADFDFYIDECMQQPLVWFPAEDIIHVVESKLTKNHGDYFLRQILKFEEMITQL 507

Query: 86  HHIK 75
             ++
Sbjct: 508 DKVQ 511


>08_02_1012 + 23550314-23551504
          Length = 396

 Score = 32.7 bits (71), Expect = 0.46
 Identities = 16/52 (30%), Positives = 21/52 (40%)
 Frame = +1

Query: 817 AXAWXRLXXPXRXPXXRPXSTQXAQXXXQKPPPAPEKXRQRXSPYPKXXPPS 972
           A AW  L  P R           A     +PPPAP   +Q+  P P+   P+
Sbjct: 122 AEAWAFLFDPVRKASLDSSLDAAAAAAAPRPPPAPSPQKQQPQPQPRSPRPA 173


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = +1

Query: 844 PXRXPXXRPXSTQXAQXXXQKPPPAPEKXRQRXSPYPKXXPPSXXXNP 987
           P R P   P   +        PP AP K  +   P P   PPS    P
Sbjct: 229 PPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSPLPPP 276


>01_06_0004 +
           25507739-25508206,25509346-25509477,25509910-25510086,
           25510175-25510219,25510305-25510512,25510766-25510825,
           25510826-25511016,25511219-25511614
          Length = 558

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 22/62 (35%), Positives = 25/62 (40%)
 Frame = +3

Query: 666 SXLPWXXXPLSPXSPPXXGXGXXPXGPLRXGXXPXPHGXPANXGXPXXXXGSRLASPXXP 845
           S  P    PLSP  PP  G G     P +    P P+  P +   P    GS  ASP  P
Sbjct: 62  SNRPSPKPPLSP--PPSPGNGKGYQSPYQPSPSPSPNA-PVS---PSPVNGSGHASPKSP 115

Query: 846 XP 851
            P
Sbjct: 116 TP 117


>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
          Length = 252

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
 Frame = +1

Query: 844 PXRXPXXRPXSTQXAQXXXQKPP-PAPEKXRQRXSPYPKXXPPSXXXNP 987
           P   P  +P   +       KPP P P+    +  P PK  PP     P
Sbjct: 159 PGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKP 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,889,473
Number of Sequences: 37544
Number of extensions: 227340
Number of successful extensions: 773
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2881826040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)