Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_E08
(798 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 343 2e-95
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 340 1e-94
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 142 7e-35
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 77 3e-15
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 33 0.063
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.25
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.3
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.4
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.2
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.5
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 343 bits (842), Expect = 2e-95
Identities = 151/194 (77%), Positives = 170/194 (87%)
Frame = -1
Query: 717 GAXNXDLTEFQTXXXPYPRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKC 538
G+ N DL EFQT PYPRIHFPLVTY+P+ SA KA+HE SV EITN CFEP NQMVKC
Sbjct: 250 GSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKC 309
Query: 537 DPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 358
DPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG
Sbjct: 310 DPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPG 369
Query: 357 GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 178
+AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL
Sbjct: 370 SGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 429
Query: 177 AALEKDYEEVGMDS 136
AALE+DYEEVG DS
Sbjct: 430 AALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 340 bits (836), Expect = 1e-94
Identities = 151/195 (77%), Positives = 169/195 (86%)
Frame = -1
Query: 720 DGAXNXDLTEFQTXXXPYPRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVK 541
+G+ N DL EFQT PYPRIHFPLVTYAP+ SA KA+HE SV EITN CFEP NQMVK
Sbjct: 245 EGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVK 304
Query: 540 CDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 361
CDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP +
Sbjct: 305 CDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIE 364
Query: 360 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 181
G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED
Sbjct: 365 GSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARED 424
Query: 180 LAALEKDYEEVGMDS 136
LAALE+DYEEVG DS
Sbjct: 425 LAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 142 bits (343), Expect = 7e-35
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Frame = -1
Query: 717 GAXNXDLTEFQTXXXPYPRIHFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKC 538
G N DL + P+PR+HF +V +AP+ + + + +SV E+T F+ N MV
Sbjct: 244 GELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAA 303
Query: 537 DPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 358
DPRHG+Y+ L+RG V K+V+ I +++TK + FV+W P + PP
Sbjct: 304 DPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK---- 359
Query: 357 GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR--- 187
DL + + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 -DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 186 EDLAALEKDYEEVGMD 139
DL + + Y+E G+D
Sbjct: 416 NDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 77.0 bits (181), Expect = 3e-15
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 7/195 (3%)
Frame = -1
Query: 717 GAXNXDLTEFQTXXXPYPRIHFPLVTYAPVXSA---EKAYHEQLSVAEITNACFEPANQM 547
G N DL P PR HF L +Y P + E + +V ++ P NQM
Sbjct: 247 GYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQM 306
Query: 546 VKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 370
V +P + +++ + +G+ P DV+ ++ I+ +R F+ W P +V ++ + P
Sbjct: 307 VSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPY 366
Query: 369 VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEF 199
+ ++ + ML+N T+IA + R ++D + + AF+ Y E + E EF
Sbjct: 367 IKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEF 421
Query: 198 SEAREDLAALEKDYE 154
+R+ +A L +YE
Sbjct: 422 DSSRDVVADLINEYE 436
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 32.7 bits (71), Expect = 0.063
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Frame = -2
Query: 779 TPTXXXHRTDXSSITXSXXSTAL*XWTSPSSRLXWXLTPVSTSHWSRTRQSXLPRRPTM- 603
TPT T +S ST+ TS S L + +++ T S P PT+
Sbjct: 356 TPTVPPTSTSSTSTPPPPASTSS-TGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVP 414
Query: 602 -NNFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSN 426
+ +P + T+ ++ + +TPV ++ CT TS P T + S P +N
Sbjct: 415 PTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTN 472
Query: 425 SSTGVQPVSRSVSTTSHP 372
+T S TS P
Sbjct: 473 CTTSTSIPYTSTPVTSTP 490
Score = 29.9 bits (64), Expect = 0.44
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = -2
Query: 692 SSRLXWXLTPVSTSHWSRTRQSXLPRRP-TMNNFPSPRSQTHASSPPTRW*NATPVMAST 516
S+ + + TPV++S+++ + + + P T N + S + S+P T +TP+ +
Sbjct: 499 STSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVT----STPLATTN 554
Query: 515 WLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 378
CT TS P T P S ++ S++ PV+ + TTS
Sbjct: 555 -----CTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 26.2 bits (55), Expect = 5.4
Identities = 23/97 (23%), Positives = 40/97 (41%)
Frame = -2
Query: 668 TPVSTSHWSRTRQSXLPRRPTMNNFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 489
TP++T++ + + P + + + T ++S P +TPV ++ CT
Sbjct: 420 TPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY---TSTPVTSTPLTTTNCTTS 476
Query: 488 TSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 378
TS P T + S P +N +T S TS
Sbjct: 477 TSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 494 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 360
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 582 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 457
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 454 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 597
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 458 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 372
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 477 WVRRHHGTAYSKPCTCHDGG 536
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 461 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 366
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,957,161
Number of Sequences: 5004
Number of extensions: 61296
Number of successful extensions: 222
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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