Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_E07
         (816 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL138691-1|CAH72340.1|  391|Homo sapiens SRY (sex determining re...    26   3.9  

>AL138691-1|CAH72340.1|  391|Homo sapiens SRY (sex determining
           region Y)-box 1 protein.
          Length = 391

 Score = 25.8 bits (54), Expect(2) = 3.9
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 193 PXXXNIHPHGHPFHP 149
           P     HPH HP HP
Sbjct: 217 PGAGGAHPHAHPAHP 231



 Score = 24.2 bits (50), Expect(2) = 3.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 175 HPHGHPFHPQ 146
           HPH HP +PQ
Sbjct: 235 HPHAHPHNPQ 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,708,147
Number of Sequences: 237096
Number of extensions: 771236
Number of successful extensions: 2266
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2259
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)