Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_E06
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0699 + 19579713-19580273                                         29   4.7  
02_05_0063 - 25523140-25524405                                         29   6.2  

>09_04_0699 + 19579713-19580273
          Length = 186

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +3

Query: 339 NRCFQDREVFHRDEGAEGDDHDRHVEVRLCRRAWDHPYRYAWDH 470
           N+    R+V   DE    DDHDRH+         DH + Y+ DH
Sbjct: 72  NKALVMRKVVVHDEMVIADDHDRHLSELAMFDQEDH-HGYSTDH 114


>02_05_0063 - 25523140-25524405
          Length = 421

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 769 RDXPRYGGRSRDPRPAGVXTCRATTSAYRTXWNLA 665
           RD  RYG R  +  PAG      +T   R  W  A
Sbjct: 387 RDRTRYGARQGERSPAGDRAANRSTRGVRAKWREA 421


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,453,638
Number of Sequences: 37544
Number of extensions: 308121
Number of successful extensions: 824
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)