Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_E06
         (847 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L26081-1|AAA65938.1|  771|Homo sapiens semaphorin-III protein.         31   5.3  
BC111416-1|AAI11417.1|  771|Homo sapiens sema domain, immunoglob...    31   5.3  
AC006322-1|AAS02028.1|  287|Homo sapiens unknown protein.              31   5.3  

>L26081-1|AAA65938.1|  771|Homo sapiens semaphorin-III protein.
          Length = 771

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 360 EVFHRDEGAEGDD-HDRHVEVRLCRRAWDHPYRYAWDHPYRHVWDHLCHRVWER 518
           E+ H+D+  +G    +    +   ++ W   +    +HP  +  D  C +VW+R
Sbjct: 675 ELLHKDDDGDGSKTKEMSNSMTPSQKVWYRDFMQLINHPNLNTMDEFCEQVWKR 728


>BC111416-1|AAI11417.1|  771|Homo sapiens sema domain,
           immunoglobulin domain (Ig), short basic domain,
           secreted, (semapho protein.
          Length = 771

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 360 EVFHRDEGAEGDD-HDRHVEVRLCRRAWDHPYRYAWDHPYRHVWDHLCHRVWER 518
           E+ H+D+  +G    +    +   ++ W   +    +HP  +  D  C +VW+R
Sbjct: 675 ELLHKDDDGDGSKTKEMSNSMTPSQKVWYRDFMQLINHPNLNTMDEFCEQVWKR 728


>AC006322-1|AAS02028.1|  287|Homo sapiens unknown protein.
          Length = 287

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 360 EVFHRDEGAEGDD-HDRHVEVRLCRRAWDHPYRYAWDHPYRHVWDHLCHRVWER 518
           E+ H+D+  +G    +    +   ++ W   +    +HP  +  D  C +VW+R
Sbjct: 191 ELLHKDDDGDGSKTKEMSNSMTPSQKVWYRDFMQLINHPNLNTMDEFCEQVWKR 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,792,574
Number of Sequences: 237096
Number of extensions: 1680899
Number of successful extensions: 3746
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3740
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)