Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_E06
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase pro...    31   0.78 
AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase pro...    31   0.78 
Z81094-5|CAB03149.2|  675|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AF536544-1|AAN77185.1|  675|Caenorhabditis elegans SR-related CT...    31   1.4  
U67953-4|AAL13329.1|  732|Caenorhabditis elegans Hypothetical pr...    30   2.4  
U53339-7|AAA96203.1|  345|Caenorhabditis elegans Serpentine rece...    28   7.3  
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami...    28   7.3  
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase
           protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +3

Query: 441 DHPYRYAWDHPYRHV-WDHLCHRVWERPCHRVSDRLYHR 554
           D P  +   H Y H  W    HR+W+  C +V D + HR
Sbjct: 88  DFPSNFLNIHDYHHRRWALHLHRIWKDLCRKVRDDVKHR 126


>AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase
           protein 1 protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +3

Query: 441 DHPYRYAWDHPYRHV-WDHLCHRVWERPCHRVSDRLYHR 554
           D P  +   H Y H  W    HR+W+  C +V D + HR
Sbjct: 88  DFPSNFLNIHDYHHRRWALHLHRIWKDLCRKVRDDVKHR 126


>Z81094-5|CAB03149.2|  675|Caenorhabditis elegans Hypothetical
           protein F58G11.5 protein.
          Length = 675

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +2

Query: 188 RLCELIIRY---EVKFAFNGTFLRLHLARTRNEMQFHCVY*LNEEENQRR 328
           +L E+I+ +   +VK   +G +LRLH+    N+  FHC     +EENQ +
Sbjct: 141 QLREIILSFLLNKVKDEASGEYLRLHILYLINDWAFHCQ--RKKEENQMK 188


>AF536544-1|AAN77185.1|  675|Caenorhabditis elegans SR-related CTD
           associated factor 6 protein.
          Length = 675

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +2

Query: 188 RLCELIIRY---EVKFAFNGTFLRLHLARTRNEMQFHCVY*LNEEENQRR 328
           +L E+I+ +   +VK   +G +LRLH+    N+  FHC     +EENQ +
Sbjct: 141 QLREIILSFLLNKVKDEASGEYLRLHILYLINDWAFHCQ--RKKEENQMK 188


>U67953-4|AAL13329.1|  732|Caenorhabditis elegans Hypothetical
           protein ZC13.3 protein.
          Length = 732

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 24/79 (30%), Positives = 32/79 (40%)
 Frame = -3

Query: 614 IRPAEMNVMDLGVTTETVPDAMIETVRDAMTGTLPDAMTEMVPDVTIGMVPGVTIGMVPG 435
           IRP  +        TE VP   ++ + +  T T     T  +P  T      +T  M  G
Sbjct: 188 IRPWTVKQTKKPKPTEVVP---VKEIEEETTTTTTTTTTTQLPTTTT--TEEITTTMPSG 242

Query: 434 ATTETDLDVTIVIVALRPL 378
            TTE   D+ IV    RPL
Sbjct: 243 PTTEVPFDLLIVGNRTRPL 261


>U53339-7|AAA96203.1|  345|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 13 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 3/23 (13%)
 Frame = +3

Query: 63  TVFITWQH---FYCNTLCSLLIR 122
           T+ IT+ H   F CNT+CS+L+R
Sbjct: 241 TLIITFTHLLFFGCNTICSILVR 263


>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
            protein 10 protein.
          Length = 2302

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = -3

Query: 566  TVPDA--MIETVRDAM-TGTLPDAMTEMVPDVTIGMVPGVTIGMV 441
            T+P++    +T+R A+ T T+P  +   VP+     +PG+T+ +V
Sbjct: 1552 TIPESAHQTQTLRSAVHTPTVPKILGVTVPEPLRSTIPGITVDLV 1596


>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical
           protein F44E2.4 protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 8/32 (25%), Positives = 22/32 (68%)
 Frame = +3

Query: 306 MKKKINAALLANRCFQDREVFHRDEGAEGDDH 401
           +++++N  ++A +CF+D++   ++   +GD H
Sbjct: 382 LQEEVNDLIIAGKCFEDKKEEEKEPVNDGDFH 413


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,223,119
Number of Sequences: 27780
Number of extensions: 275804
Number of successful extensions: 702
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)