Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_E03
         (1151 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2QUI9 Cluster: Transposon protein, putative, CACTA, En...    34   6.0  
UniRef50_Q6ZD62 Cluster: Putative pherophorin-dz1 protein; n=4; ...    34   8.0  

>UniRef50_Q2QUI9 Cluster: Transposon protein, putative, CACTA,
           En/Spm sub-class; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Transposon protein, putative,
           CACTA, En/Spm sub-class - Oryza sativa subsp. japonica
           (Rice)
          Length = 884

 Score = 34.3 bits (75), Expect = 6.0
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
 Frame = +3

Query: 567 HPPRPQXX--PXXQXTPPXSXNRXRPXXAPXPXXXGPXPXXEXXXXXXPRQIPVSXP 731
           HPP P     P  Q TPP S ++  P  AP P    P    +      P  +  S P
Sbjct: 412 HPPSPPPLRSPPRQPTPPPSPSQQPPLPAPQPVQASPTSLAKQHAPPAPPSVQTSPP 468


>UniRef50_Q6ZD62 Cluster: Putative pherophorin-dz1 protein; n=4;
           Eukaryota|Rep: Putative pherophorin-dz1 protein - Oryza
           sativa subsp. japonica (Rice)
          Length = 342

 Score = 33.9 bits (74), Expect = 8.0
 Identities = 29/120 (24%), Positives = 34/120 (28%), Gaps = 2/120 (1%)
 Frame = +3

Query: 564 IHPPRPQXXPXXQXTPPXSXNRXRPXXAP--XPXXXGPXPXXEXXXXXXPRQIPVSXPXX 737
           + PPRPQ  P  Q  PP      RP   P   P   G  P         PR+ P   P  
Sbjct: 36  VMPPRPQAPPPPQRFPPPPAPPIRPPSPPGRAPPPPGRAPPPPSQAPPPPRRAP--PPPA 93

Query: 738 XRSXAPRHPXXXXXVPSGXXIXXSXPXXSTXXXLXXXGPDIXLGPXXPXGXXNXTPQLXP 917
                PR       +P       + P  +T        P     P  P       P   P
Sbjct: 94  LPPPPPRRAPPPPSMPPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPP 153


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,129,672
Number of Sequences: 1657284
Number of extensions: 3683372
Number of successful extensions: 6395
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5624
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 114252926083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)