Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_E02
         (803 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal prot...   379   e-105
U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal prot...   379   e-105
AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p pro...   379   e-105
AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA...   379   e-105
X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml prot...   378   e-105
AY071397-1|AAL49019.1|  407|Drosophila melanogaster RE47909p pro...    32   0.80 
AE014296-3798|ABI31280.1|  407|Drosophila melanogaster CG40049-P...    32   0.80 
AE014296-3797|EAA46075.1|  407|Drosophila melanogaster CG40049-P...    32   0.80 
AE014296-3796|EAA46076.2|  916|Drosophila melanogaster CG40049-P...    32   0.80 
AE014296-2238|AAF49848.1|  954|Drosophila melanogaster CG11274-P...    30   3.2  

>U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  379 bits (932), Expect = e-105
 Identities = 181/222 (81%), Positives = 192/222 (86%), Gaps = 2/222 (0%)
 Frame = -2

Query: 730 WARXR--KTQKEWVPVTKXGRXVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVL 557
           WAR R  +  KEWVPVTK GR VREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVL
Sbjct: 31  WARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVL 90

Query: 556 KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 377
           KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRR
Sbjct: 91  KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRR 150

Query: 376 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 197
           GYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSAR
Sbjct: 151 GYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSAR 210

Query: 196 GSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 71
           GSTGTLGNF             YLTPDLW+++PL  +PY  +
Sbjct: 211 GSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252


>U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  379 bits (932), Expect = e-105
 Identities = 181/222 (81%), Positives = 192/222 (86%), Gaps = 2/222 (0%)
 Frame = -2

Query: 730 WARXR--KTQKEWVPVTKXGRXVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVL 557
           WAR R  +  KEWVPVTK GR VREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVL
Sbjct: 31  WARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVL 90

Query: 556 KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 377
           KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRR
Sbjct: 91  KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRR 150

Query: 376 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 197
           GYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSAR
Sbjct: 151 GYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSAR 210

Query: 196 GSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 71
           GSTGTLGNF             YLTPDLW+++PL  +PY  +
Sbjct: 211 GSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252


>AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p
           protein.
          Length = 267

 Score =  379 bits (932), Expect = e-105
 Identities = 181/222 (81%), Positives = 192/222 (86%), Gaps = 2/222 (0%)
 Frame = -2

Query: 730 WARXR--KTQKEWVPVTKXGRXVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVL 557
           WAR R  +  KEWVPVTK GR VREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVL
Sbjct: 31  WARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVL 90

Query: 556 KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 377
           KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRR
Sbjct: 91  KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRR 150

Query: 376 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 197
           GYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSAR
Sbjct: 151 GYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSAR 210

Query: 196 GSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 71
           GSTGTLGNF             YLTPDLW+++PL  +PY  +
Sbjct: 211 GSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252


>AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA
           protein.
          Length = 267

 Score =  379 bits (932), Expect = e-105
 Identities = 181/222 (81%), Positives = 192/222 (86%), Gaps = 2/222 (0%)
 Frame = -2

Query: 730 WARXR--KTQKEWVPVTKXGRXVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVL 557
           WAR R  +  KEWVPVTK GR VREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVL
Sbjct: 31  WARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVL 90

Query: 556 KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 377
           KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRR
Sbjct: 91  KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRR 150

Query: 376 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 197
           GYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSAR
Sbjct: 151 GYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSAR 210

Query: 196 GSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 71
           GSTGTLGNF             YLTPDLW+++PL  +PY  +
Sbjct: 211 GSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252


>X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml protein
           S2 protein.
          Length = 267

 Score =  378 bits (929), Expect = e-105
 Identities = 180/222 (81%), Positives = 192/222 (86%), Gaps = 2/222 (0%)
 Frame = -2

Query: 730 WARXR--KTQKEWVPVTKXGRXVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVL 557
           WAR R  +  KEWVPVTK GR VREGKI  LE IYL+SLPIKEFEIIDFFLG SL DEVL
Sbjct: 31  WARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVL 90

Query: 556 KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 377
           KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRR
Sbjct: 91  KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRR 150

Query: 376 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 197
           GYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MAG++DCYTSAR
Sbjct: 151 GYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSAR 210

Query: 196 GSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 71
           GSTGTLGNF             YLTPDLW+++PL  +PY  +
Sbjct: 211 GSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252


>AY071397-1|AAL49019.1|  407|Drosophila melanogaster RE47909p
           protein.
          Length = 407

 Score = 32.3 bits (70), Expect = 0.80
 Identities = 24/112 (21%), Positives = 45/112 (40%)
 Frame = -2

Query: 523 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 344
           G++ R+      G+ NG  G     + EV TA+R +   A   ++ +        + +  
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241

Query: 343 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 188
           T+        G   +     P G G+V     + + ++ G++D Y    GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293


>AE014296-3798|ABI31280.1|  407|Drosophila melanogaster CG40049-PC,
           isoform C protein.
          Length = 407

 Score = 32.3 bits (70), Expect = 0.80
 Identities = 24/112 (21%), Positives = 45/112 (40%)
 Frame = -2

Query: 523 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 344
           G++ R+      G+ NG  G     + EV TA+R +   A   ++ +        + +  
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241

Query: 343 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 188
           T+        G   +     P G G+V     + + ++ G++D Y    GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293


>AE014296-3797|EAA46075.1|  407|Drosophila melanogaster CG40049-PA,
           isoform A protein.
          Length = 407

 Score = 32.3 bits (70), Expect = 0.80
 Identities = 24/112 (21%), Positives = 45/112 (40%)
 Frame = -2

Query: 523 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 344
           G++ R+      G+ NG  G     + EV TA+R +   A   ++ +        + +  
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241

Query: 343 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 188
           T+        G   +     P G G+V     + + ++ G++D Y    GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293


>AE014296-3796|EAA46076.2|  916|Drosophila melanogaster CG40049-PB,
           isoform B protein.
          Length = 916

 Score = 32.3 bits (70), Expect = 0.80
 Identities = 24/112 (21%), Positives = 45/112 (40%)
 Frame = -2

Query: 523 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 344
           G++ R+      G+ NG  G     + EV TA+R +   A   ++ +        + +  
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241

Query: 343 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 188
           T+        G   +     P G G+V     + + ++ G++D Y    GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293



 Score = 32.3 bits (70), Expect = 0.80
 Identities = 24/112 (21%), Positives = 45/112 (40%)
 Frame = -2

Query: 523 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 344
           G++ R+      G+ NG  G     + EV TA+R +   A   ++ +        + +  
Sbjct: 466 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 518

Query: 343 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 188
           T+        G   +     P G G+V     + + ++ G++D Y    GST
Sbjct: 519 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 570



 Score = 32.3 bits (70), Expect = 0.80
 Identities = 24/112 (21%), Positives = 45/112 (40%)
 Frame = -2

Query: 523  GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 344
            G++ R+      G+ NG  G     + EV TA+R +   A   ++ +        + +  
Sbjct: 743  GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 795

Query: 343  TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 188
            T+        G   +     P G G+V     + + ++ G++D Y    GST
Sbjct: 796  TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 847


>AE014296-2238|AAF49848.1|  954|Drosophila melanogaster CG11274-PA
            protein.
          Length = 954

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -2

Query: 349  PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 227
            PH+V  K  G  G + + L+P   G G+++  + K+L + A
Sbjct: 907  PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,649,536
Number of Sequences: 53049
Number of extensions: 836087
Number of successful extensions: 2285
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)