Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D23
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,787...    35   0.093
01_07_0226 + 42130300-42131430,42131530-42131715,42133244-421333...    30   2.6  
11_01_0428 + 3279662-3279784,3281676-3281756,3281845-3281933,328...    29   4.6  
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697...    29   4.6  
12_02_0910 + 24225180-24225415,24225523-24225678,24226387-242264...    28   8.1  

>01_01_0995 +
           7875273-7875495,7876196-7876274,7876422-7876536,
           7878507-7878761
          Length = 223

 Score = 34.7 bits (76), Expect = 0.093
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -1

Query: 477 GSYSYEDHYAPPEPPMRGGGRAAEPDVYYERGHERFYEDEAHYREEP-REYKASSRDVG 304
           G++     Y PP PP+ G  + A P   Y +G + +Y     Y+  P R+Y+A +R  G
Sbjct: 29  GTFQGPPSYPPPRPPVVGYPQPAPPPGLYGQG-DPYYRPRGGYQGIPARDYEAGARGHG 86


>01_07_0226 +
           42130300-42131430,42131530-42131715,42133244-42133345,
           42133425-42133481,42133563-42133658,42133736-42133828,
           42133945-42134064,42134155-42134187,42134266-42134316,
           42135129-42135191
          Length = 643

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = -1

Query: 405 PDVYYERGHERFYEDEAHYREEPREYKASSRD 310
           P + YE+G+ ++YED   +  +P  ++ ++ D
Sbjct: 398 PSILYEKGYFQYYEDSLEWYFDPERFQPAALD 429


>11_01_0428 +
           3279662-3279784,3281676-3281756,3281845-3281933,
           3282011-3282085,3282211-3282269,3282316-3282414,
           3282762-3283013,3283050-3283180
          Length = 302

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -1

Query: 426 GGGRAAEPDVYYERGHERFYEDEAHYREEPREYKASSR 313
           GG R      Y   G   +YED+  Y EEP +Y    R
Sbjct: 222 GGRRGGYGYDYGYGGRGDYYEDQGEYFEEPEDYPPPGR 259


>02_02_0119 +
           6978697-6979045,6979519-6979581,6979757-6979866,
           6979969-6980154,6980266-6980361,6980493-6980564,
           6980798-6980909,6982448-6982534,6982680-6983872
          Length = 755

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 21/71 (29%), Positives = 28/71 (39%)
 Frame = -1

Query: 513 ISILERARTAMEGSYSYEDHYAPPEPPMRGGGRAAEPDVYYERGHERFYEDEAHYREEPR 334
           I +  RAR  M G YS +  Y PP P    G     P    + G+   Y     Y   P 
Sbjct: 363 IFLQNRARNPMSGGYS-QQGYRPPRPQSNWGPHGGAP--MQQPGYG--YMQPGAYPGAPP 417

Query: 333 EYKASSRDVGT 301
           +Y A  +  G+
Sbjct: 418 QYGAPQQPYGS 428


>12_02_0910 +
           24225180-24225415,24225523-24225678,24226387-24226450,
           24226738-24226947,24227678-24227866,24228044-24228342,
           24228575-24228851,24229045-24229317,24230316-24230549,
           24230707-24230856
          Length = 695

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -1

Query: 504 LERARTAMEGSYSYEDHYAPPEPPMRGGGRAAEPDVYYERG 382
           L R R      YS    YAPPEP +    R  E DV+   G
Sbjct: 26  LLRRRPPYVAVYSPRRPYAPPEPWLPAAWRRTEADVHAAAG 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,719,546
Number of Sequences: 37544
Number of extensions: 198291
Number of successful extensions: 670
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)