Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D23
         (840 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.7  
SB_4517| Best HMM Match : DUF298 (HMM E-Value=7.7)                     29   6.2  
SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)         28   8.2  

>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 831

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 465 YEDHYAPPEPPMRGGGRAAEPDVYYERGHERFYEDEAHY 349
           + D Y PP PP R   ++ + D  ++RG  R ++D   Y
Sbjct: 73  FYDDYPPPPPPPRRDEKSYDYDDSWDRGPGRPHDDRYDY 111


>SB_4517| Best HMM Match : DUF298 (HMM E-Value=7.7)
          Length = 322

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 516 IISILERARTAMEGSYSYEDHYAPPEPP 433
           +  + ERA+ A EGS S  +  AP EPP
Sbjct: 126 VAKVTERAKRADEGSESGSERSAPCEPP 153


>SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
          Length = 1584

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 501  ERARTAMEGSYSYE-DHYAPPEPPMRGGGRAAEPDVYYERGHERFYE 364
            + A+ A+ GS  Y  D +   +  +R GGR    ++ YE+ H   YE
Sbjct: 1224 KHAKKALRGSPLYRLDPFLDSDGILRVGGRLRRAEMNYEQKHPPVYE 1270


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,143,000
Number of Sequences: 59808
Number of extensions: 205458
Number of successful extensions: 463
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)