Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D23
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095201-1|AAM12294.1|  428|Drosophila melanogaster RE34120p pro...    31   2.6  
AF096272-1|AAC72375.1|  428|Drosophila melanogaster Sam50 protein.     31   2.6  
AF038582-1|AAB97002.1|  425|Drosophila melanogaster QKR54B protein.    31   2.6  
AE013599-2475|AAM70876.1|  428|Drosophila melanogaster CG4816-PB...    31   2.6  
AE013599-2474|AAF57857.1|  428|Drosophila melanogaster CG4816-PA...    31   2.6  

>AY095201-1|AAM12294.1|  428|Drosophila melanogaster RE34120p
           protein.
          Length = 428

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
 Frame = -1

Query: 525 KNKIISILERARTAMEGSY--SYED 457
           K K++SILE+ARTAM+ +Y   Y+D
Sbjct: 300 KQKVMSILEKARTAMDETYGRGYDD 324


>AF096272-1|AAC72375.1|  428|Drosophila melanogaster Sam50 protein.
          Length = 428

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
 Frame = -1

Query: 525 KNKIISILERARTAMEGSY--SYED 457
           K K++SILE+ARTAM+ +Y   Y+D
Sbjct: 300 KQKVMSILEKARTAMDETYGRGYDD 324


>AF038582-1|AAB97002.1|  425|Drosophila melanogaster QKR54B protein.
          Length = 425

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
 Frame = -1

Query: 525 KNKIISILERARTAMEGSY--SYED 457
           K K++SILE+ARTAM+ +Y   Y+D
Sbjct: 299 KQKVMSILEKARTAMDETYGRGYDD 323


>AE013599-2475|AAM70876.1|  428|Drosophila melanogaster CG4816-PB,
           isoform B protein.
          Length = 428

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
 Frame = -1

Query: 525 KNKIISILERARTAMEGSY--SYED 457
           K K++SILE+ARTAM+ +Y   Y+D
Sbjct: 300 KQKVMSILEKARTAMDETYGRGYDD 324


>AE013599-2474|AAF57857.1|  428|Drosophila melanogaster CG4816-PA,
           isoform A protein.
          Length = 428

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
 Frame = -1

Query: 525 KNKIISILERARTAMEGSY--SYED 457
           K K++SILE+ARTAM+ +Y   Y+D
Sbjct: 300 KQKVMSILEKARTAMDETYGRGYDD 324


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,576,484
Number of Sequences: 53049
Number of extensions: 321070
Number of successful extensions: 871
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)