Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D23
         (840 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021492-12|CAJ76949.1|  622|Caenorhabditis elegans Hypothetical...    34   0.11 
AL021492-11|CAA16378.1|  684|Caenorhabditis elegans Hypothetical...    34   0.11 

>AL021492-12|CAJ76949.1|  622|Caenorhabditis elegans Hypothetical
           protein Y45F10D.3b protein.
          Length = 622

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 450 APPEPPMRGGGRAAEPDVYYERGHERF-YEDEAHYREEPR 334
           A P PP   G  A +P   Y RGHE+  +EDEA Y +E R
Sbjct: 55  ANPNPPAALGDEALDPFEKY-RGHEKIKWEDEAAYEKEKR 93


>AL021492-11|CAA16378.1|  684|Caenorhabditis elegans Hypothetical
           protein Y45F10D.3a protein.
          Length = 684

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 450 APPEPPMRGGGRAAEPDVYYERGHERF-YEDEAHYREEPR 334
           A P PP   G  A +P   Y RGHE+  +EDEA Y +E R
Sbjct: 117 ANPNPPAALGDEALDPFEKY-RGHEKIKWEDEAAYEKEKR 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,294,937
Number of Sequences: 27780
Number of extensions: 164933
Number of successful extensions: 447
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)