Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D23
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.5  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   8.1  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   8.1  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   8.1  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   8.1  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   8.1  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 459 DHYAPPEPPMRGG 421
           D   PP PP+RGG
Sbjct: 372 DEPLPPPPPIRGG 384


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = -1

Query: 393 YERGHER---FYEDEAHYREEPREYKASSRD 310
           Y R  ER    Y++E  YR+    +K  SRD
Sbjct: 39  YSRSREREQKSYKNENSYRKYRETWKERSRD 69


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = -1

Query: 393 YERGHER---FYEDEAHYREEPREYKASSRD 310
           Y R  ER    Y++E  YR+    +K  SRD
Sbjct: 39  YSRSREREQKSYKNENSYRKYRETWKERSRD 69


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = -1

Query: 393 YERGHER---FYEDEAHYREEPREYKASSRD 310
           Y R  ER    Y++E  YR+    +K  SRD
Sbjct: 39  YSRSREREQKSYKNENSYRKYRETWKERSRD 69


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = -1

Query: 393 YERGHER---FYEDEAHYREEPREYKASSRD 310
           Y R  ER    Y++E  YR+    +K  SRD
Sbjct: 39  YSRSREREQKSYKNENSYRKYRETWKERSRD 69


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = -1

Query: 393 YERGHER---FYEDEAHYREEPREYKASSRD 310
           Y R  ER    Y++E  YR+  +  K  SRD
Sbjct: 261 YSRSREREQKSYKNEREYRKYGKTSKERSRD 291


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,775
Number of Sequences: 438
Number of extensions: 2124
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)