Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_D20
(816 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 146 4e-36
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 143 2e-35
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 109 6e-25
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 55 1e-08
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 51 2e-07
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 33 0.048
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.064
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.11
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.11
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 31 0.20
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 30 0.34
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.34
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.79
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 1.0
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 1.0
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 29 1.0
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 28 1.4
SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit Ssr4|Schizos... 28 1.8
SPAC3A12.11c |cwf2|prp3|RNA-binding protein Cwf2|Schizosaccharom... 27 3.2
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 4.2
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 4.2
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 4.2
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.6
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 5.6
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 5.6
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 5.6
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 7.4
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.4
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 9.7
SPBP23A10.12 |||FRG1 family protein|Schizosaccharomyces pombe|ch... 25 9.7
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 25 9.7
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 146 bits (353), Expect = 4e-36
Identities = 74/155 (47%), Positives = 98/155 (63%)
Frame = -2
Query: 689 GKFELTGXPTRRRVACLKLRXXXXXXXXXXXXXPLSRSPPXKENKITITNDKGRLSKEEI 510
GKFEL+G P R ++ K KITITNDKGRLSKEEI
Sbjct: 455 GKFELSGIPPAPR-GVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEI 513
Query: 509 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGEKLKEKISDSDKQTILDKCN 330
+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++ LK+K+ SDK+ I
Sbjct: 514 DRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVK 573
Query: 329 DTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKM 225
+TI+WLD N A K+EYE KQKELEG+ NPI+ K+
Sbjct: 574 ETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKI 608
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 143 bits (347), Expect = 2e-35
Identities = 73/155 (47%), Positives = 98/155 (63%)
Frame = -2
Query: 689 GKFELTGXPTRRRVACLKLRXXXXXXXXXXXXXPLSRSPPXKENKITITNDKGRLSKEEI 510
GKFEL+G P R ++ K KITITNDKGRLSKEEI
Sbjct: 455 GKFELSGIPPAPR-GVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEI 513
Query: 509 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGEKLKEKISDSDKQTILDKCN 330
+RMV EAEKY+ ED+ + IQAKN LESY +S++++++ LK+K+ SDK+T+
Sbjct: 514 DRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVK 573
Query: 329 DTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKM 225
+TI+WLDSN A K+E+E KQKELE + NPI+ K+
Sbjct: 574 ETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKI 608
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 109 bits (261), Expect = 6e-25
Identities = 59/157 (37%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Frame = -2
Query: 689 GKFELTGXPTRRRVACLKLRXXXXXXXXXXXXXPLSRSPPXKENKITITNDKGRLSKEEI 510
GKF+L G P R + +S K K+ I NDKGRLS+E+I
Sbjct: 484 GKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDI 543
Query: 509 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EGEKLKEKISDSDKQTILDKC 333
ERMV EAE++ ED KE I+A+N LE+Y +S+K + E+L K+ DKQ +LD
Sbjct: 544 ERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAV 603
Query: 332 NDTIKWLD-SNQLADKEEYEHKQKELEGIYNPIITKM 225
D +WL+ + A KEE+E ++++L+ + +PI K+
Sbjct: 604 EDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKL 640
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 55.2 bits (127), Expect = 1e-08
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Frame = -2
Query: 689 GKFELTGXPTRRRVACLKLRXXXXXXXXXXXXXPLSRSPPXKENKITITNDKGRLSKEEI 510
G+F+LTG P R +L + I ITN G LS +I
Sbjct: 460 GEFQLTGIPPMPRGQA-ELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKI 518
Query: 509 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGEKLKEKISDSDKQTI---LD 339
+ M+ A+K++ +D + ++AK+ LESY ++++T+ + K+ DK I L
Sbjct: 519 QEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKIEAQLA 578
Query: 338 KCNDTIKWLDSN 303
+C ++ D+N
Sbjct: 579 ECMSQLELEDTN 590
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 50.8 bits (116), Expect = 2e-07
Identities = 21/30 (70%), Positives = 28/30 (93%)
Frame = -1
Query: 660 PAPRGVPQIEVTFDIDANGILNVSAIEKST 571
PAP+G PQIEV+FD+DA+GI+NVSA +K+T
Sbjct: 507 PAPKGQPQIEVSFDVDADGIINVSARDKAT 536
Score = 50.4 bits (115), Expect = 3e-07
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = -2
Query: 566 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME-- 393
K++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++
Sbjct: 538 KDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIH 596
Query: 392 GEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 255
+KL ++ + + I D K ++ E+ + K E++
Sbjct: 597 KDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQ 642
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 33.1 bits (72), Expect = 0.048
Identities = 31/132 (23%), Positives = 53/132 (40%)
Frame = -2
Query: 581 RSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 402
+ P K T+ + + E+ + E EK + +A+ A +
Sbjct: 209 QKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSA 268
Query: 401 TMEGEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMX 222
+E EK KEK D D++ DT+ D NQ+ D+ E K+ + E + P + +
Sbjct: 269 KLEKEKAKEKQKDKDQE------QDTVS--DKNQI-DEIEKGQKEVDEEPVSEPTTSPIL 319
Query: 221 PGCRRSPRRYAG 186
P + P R G
Sbjct: 320 PPKNQEPIRMGG 331
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.7 bits (71), Expect = 0.064
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = -2
Query: 554 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMEG--EK 384
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAP 600
Query: 383 LKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGIYNPI 237
+ S + +L K D WL + + K Y K ++L + PI
Sbjct: 601 FTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 31.9 bits (69), Expect = 0.11
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = -2
Query: 518 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGEKLKEKISDSDKQTILD 339
EE++ +NEA+K NE ++ I+ +L+ +++ ++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 338 K 336
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.11
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -2
Query: 536 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMK--STMEGEKLKEKISD 363
+GR + + N+ E + DDKQ + KN+LE+ M+ S +EG+ K D
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEGD---AKTGD 1315
Query: 362 SDKQTILDKCNDTIK 318
++ LDK D K
Sbjct: 1316 DNEMEDLDKMEDLEK 1330
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.1 bits (67), Expect = 0.20
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = -2
Query: 527 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE-SYCFSMKSTMEGEKLKEKISDSDKQ 351
L+ + ++ + E E K+ ET++ KN+ + + ++ EG LK +K
Sbjct: 485 LASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKD 544
Query: 350 TILDKCNDTIKWLDSN--QLADK-EEYEHKQKELEGIYNPII 234
++++ IK + N +L +EY +K K+ E YN ++
Sbjct: 545 RLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVM 586
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 30.3 bits (65), Expect = 0.34
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -2
Query: 380 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKEL-EGIYNPIITKMXPG--C 213
+EKI +++TI D K + + ++ EEY KQKEL E + P ++ P
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQEELEFPDEVELQPNELA 486
Query: 212 RRSPRRYAGL 183
R ++Y GL
Sbjct: 487 RERFKKYRGL 496
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.34
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -2
Query: 524 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGEKLKEKISDSDKQTI 345
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 344 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 255
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 536 KGRLSKEEIERMVNEAEKYRNEDD 465
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.7 bits (61), Expect = 1.0
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = -2
Query: 530 RLSKEEIERMVNEAEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEGEKLKEKISDSDK 354
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 353 QTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMXPGCRRSPRRY 192
+T + + K L +N+L+ E + E E Y + + R++ Y
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDY 1062
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 542 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEGEKLKEKIS 366
+DK + E + E YRNE +E++ +N L S +++ +E K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 365 DSDKQT 348
+D+ T
Sbjct: 695 -TDRLT 699
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 28.7 bits (61), Expect = 1.0
Identities = 22/95 (23%), Positives = 42/95 (44%)
Frame = -2
Query: 548 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGEKLKEKI 369
+ +K SKE ++ EAE+ E +E + + + S K + ++LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRL--DELKAKA 490
Query: 368 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 264
D++++ D +K+ L + EY +QK
Sbjct: 491 EDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQK 524
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 28.7 bits (61), Expect = 1.0
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -2
Query: 503 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST---MEGEKLKEKI 369
M+++ RN+ +KQ TI KNA++ Y S+K T M G K E+I
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKITDIRMLGGKFGEEI 292
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -2
Query: 566 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGE 387
K+ K T D SKEE+E +V E E D +Q + K+ L++ F +
Sbjct: 530 KKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNR 580
Query: 386 KLKEKISD 363
KLK+K S+
Sbjct: 581 KLKKKASN 588
>SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit
Ssr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = -2
Query: 575 PPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 396
PP + + G+ K+ E++V + +KY++ T N L+ + ++KS
Sbjct: 310 PPALWQEPNSMEELGKELKDNKEQLVKQDQKYQSLQGDLSYTDSMSNLLKEFS-NIKSAE 368
Query: 395 EGEKLKEKISD 363
E + L++KI +
Sbjct: 369 ECDVLQKKIEE 379
>SPAC3A12.11c |cwf2|prp3|RNA-binding protein
Cwf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 27.1 bits (57), Expect = 3.2
Identities = 23/88 (26%), Positives = 39/88 (44%)
Frame = -2
Query: 464 KQKETIQAKNALESYCFSMKSTMEGEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 285
+Q+ T++ KN + K +EGEK KE K I+ + + Q+ +
Sbjct: 7 EQEVTVEEKNN----DVTEKILVEGEKSKEYEETPRKVKIVKRKKQPAR----KQIETRP 58
Query: 284 EYEHKQKELEGIYNPIITKMXPGCRRSP 201
EYE + ++ +YN K G R+ P
Sbjct: 59 EYEMEPEQPGQVYNLWYNKWSGGMRQDP 86
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 4.2
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -2
Query: 500 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGEKLKEKISDSDKQTILDKCNDTI 321
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELSGK--NVLFFYFLEDDSEKLLKACQHFI 887
Query: 320 KWLDSNQLADKEEYEHKQKELEGIYNPI 237
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 26.6 bits (56), Expect = 4.2
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = -2
Query: 572 PXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 393
P + I +T + R S E V + E ++D + +++NA + S +
Sbjct: 234 PDLSSLIRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLS 291
Query: 392 GEKLKEKISDSDKQTILDKCNDTIK 318
+KEK S +K DK + K
Sbjct: 292 ESSMKEKQSKIEKYMKSDKSSKNFK 316
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -2
Query: 563 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 393
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 5.6
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -2
Query: 521 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEGEKLKEKI 369
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 368 SDSDKQTILDKCND 327
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/86 (19%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = -2
Query: 518 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEGEKLKEKISDSDKQTIL 342
+++E+M +K ++E+ ++ ETI Q + +E ++S +E E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 341 DKCNDTIKWLDSNQLADKEEYEHKQK 264
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 5.6
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -2
Query: 554 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGEKLK 378
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 377 EKISDSDKQTILDKC 333
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -2
Query: 524 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 402
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 536 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 426
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -2
Query: 521 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGEKLKEKISDSDKQTIL 342
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 341 D 339
D
Sbjct: 451 D 451
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = -2
Query: 539 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEGEKLKEKISDS 360
DK + E+I + ++Y NED+ + +++ A S+ ++ +T++ + KI +S
Sbjct: 399 DKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPAAVSFS-TITNTIQAKYSNRKIKNS 457
Query: 359 D 357
+
Sbjct: 458 N 458
>SPBP23A10.12 |||FRG1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 245
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 413 SMKSTMEGEKL---KEKISDSDKQTILDKCNDTIKWLDSNQLADKE 285
SM+ T +G+K K+K + Q+ L+ + W D+N+L + E
Sbjct: 2 SMRLTFKGDKKIQKKKKKNTKSLQSSLESAENDPFWTDANELNELE 47
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 25.4 bits (53), Expect = 9.7
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -2
Query: 413 SMKSTMEGEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPII 234
S+ S+ KL D K + L C ++ K DSNQ+ + E K+K+ + II
Sbjct: 188 SLVSSNTASKLHLGRKDIVKLSELRNCINSSK--DSNQIQELENLLRKEKQRNTEHEKII 245
Query: 233 TKM 225
+M
Sbjct: 246 RRM 248
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,527,842
Number of Sequences: 5004
Number of extensions: 44224
Number of successful extensions: 210
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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